Conservation of cofitness between CSW01_12610 and CSW01_16835 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12610 3-isopropylmalate dehydratase small subunit 1.0 CSW01_16835 catabolite repressor/activator 0.70 17
Serratia liquefaciens MT49 0.78 IAI46_03340 3-isopropylmalate dehydratase small subunit 0.42 IAI46_03385 catabolite repressor/activator low > 86
Dickeya dadantii 3937 0.78 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit 0.42 DDA3937_RS18095 catabolite repressor/activator low > 74
Pectobacterium carotovorum WPP14 0.77 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.41 HER17_RS03105 catabolite repressor/activator low > 75
Dickeya dianthicola ME23 0.76 DZA65_RS19215 3-isopropylmalate dehydratase small subunit 0.42 DZA65_RS19175 catabolite repressor/activator low > 75
Dickeya dianthicola 67-19 0.76 HGI48_RS18070 3-isopropylmalate dehydratase small subunit 0.42 HGI48_RS18030 catabolite repressor/activator low > 71
Klebsiella pneumoniae MKP103 0.75 KDGMDA_12895 3-isopropylmalate dehydratase small subunit 0.41 KDGMDA_12935 catabolite repressor/activator low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.41 GFF158 Fructose repressor FruR, LacI family low > 78
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS12985 3-isopropylmalate dehydratase small subunit 0.41 PagCFBP13505_RS13020 catabolite repressor/activator low > 74
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit 0.42 EX28DRAFT_3675 transcriptional regulator, LacI family low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit 0.42 OHPLBJKB_03579 Catabolite repressor/activator low > 74
Klebsiella michiganensis M5al 0.73 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.42 BWI76_RS04705 DNA-binding transcriptional regulator FruR low > 92
Pantoea sp. MT58 0.73 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.41 IAI47_15980 catabolite repressor/activator low > 76
Rahnella sp. WP5 0.73 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.42 EX31_RS03655 catabolite repressor/activator low > 89
Escherichia coli ECRC62 0.72 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit 0.41 BNILDI_08580 cra catabolite repressor/activator low > 75
Escherichia coli BW25113 0.72 b0071 leuD isopropylmalate isomerase small subunit (NCBI) 0.42 b0080 fruR DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli BL21 0.72 ECD_00073 3-isopropylmalate dehydratase small subunit 0.42 ECD_00081 transcriptional repressor-activator for carbon metabolism low > 61
Escherichia fergusonii Becca 0.72 EFB2_03974 3-isopropylmalate dehydratase small subunit 0.42 EFB2_03967 Catabolite repressor/activator low > 86
Escherichia coli ECOR27 0.72 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit 0.41 NOLOHH_03030 cra catabolite repressor/activator low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit 0.42 ECOLIN_RS00430 catabolite repressor/activator low > 55
Escherichia coli ECOR38 0.72 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit 0.41 HEPCGN_08665 cra catabolite repressor/activator low > 88
Escherichia coli ECRC102 0.72 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit 0.41 NIAGMN_08535 cra catabolite repressor/activator low > 80
Escherichia coli ECRC99 0.72 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit 0.41 KEDOAH_17470 cra catabolite repressor/activator
Escherichia coli ECRC101 0.72 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit 0.41 MCAODC_01200 cra catabolite repressor/activator low > 88
Escherichia coli ECRC98 0.72 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit 0.41 JDDGAC_14280 cra catabolite repressor/activator low > 87
Escherichia coli ECRC100 0.72 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit 0.41 OKFHMN_10685 cra catabolite repressor/activator low > 79
Enterobacter sp. TBS_079 0.71 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 0.42 MPMX20_00773 Catabolite repressor/activator low > 85
Erwinia tracheiphila SCR3 0.65 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit 0.43 LU632_RS02900 cra catabolite repressor/activator low > 74
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_06010 leuD 3-isopropylmalate dehydratase small subunit 0.43 IJEDHG_05975 cra catabolite repressor/activator low > 61
Erwinia amylovora T8 0.64 OLJFJH_01300 3-isopropylmalate dehydratase small subunit 0.40 OLJFJH_01270 catabolite repressor/activator low > 58
Pseudomonas simiae WCS417 0.61 PS417_18595 3-isopropylmalate dehydratase 0.43 PS417_03960 transcriptional regulator
Pseudomonas stutzeri RCH2 0.61 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.45 Psest_3356 D-fructose-responsive transcription factor low > 67
Pseudomonas sp. SVBP6 0.60 COO64_RS05660 leuD 3-isopropylmalate dehydratase small subunit 0.45 COO64_RS11270 cra catabolite repressor/activator low > 93
Pseudomonas fluorescens SBW25 0.60 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.43 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.43 PFLU_RS04005 catabolite repressor/activator low > 109
Pseudomonas putida KT2440 0.60 PP_1986 3-isopropylmalate dehydratase small subunit 0.41 PP_0792 catabolite repressor-activator, DNA-binding transcriptional dual regulator low > 96
Pseudomonas lactucae CFBP13502 0.60 GEMAOFIL_03947 3-isopropylmalate dehydratase small subunit 0.39 GEMAOFIL_00996 Catabolite repressor/activator low > 93
Pseudomonas sp. BP01 0.60 JOY50_RS16625 leuD 3-isopropylmalate dehydratase small subunit 0.41 JOY50_RS19320 cra catabolite repressor/activator low > 84
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.45 Pf1N1B4_1147 Fructose repressor FruR, LacI family
Pseudomonas sp. DMC3 0.59 GFF786 3-isopropylmalate dehydratase small subunit 1 0.44 GFF5002 Catabolite repressor/activator low > 89
Pseudomonas aeruginosa PA14 0.59 IKLFDK_15875 3-isopropylmalate dehydratase small subunit 0.44 IKLFDK_18185 catabolite repressor/activator low > 100
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.42 PfGW456L13_5077 Fructose repressor FruR, LacI family low > 87
Pseudomonas sp. RS175 0.59 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 0.45 PFR28_00104 Catabolite repressor/activator low > 88
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.45 Pf6N2E2_3340 Fructose repressor FruR, LacI family 0.38 85
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_20625 3-isopropylmalate dehydratase 0.45 AO353_05490 transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_21405 3-isopropylmalate dehydratase 0.45 AO356_07340 transcriptional regulator low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.46 Psyr_0820 transcriptional regulator, LacI family low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.46 Psyr_0820 transcriptional regulator, LacI family low > 86
Agrobacterium fabrum C58 0.49 Atu2790 3-isopropylmalate dehydratase, small subunit 0.14 Atu4743 LacI family transcriptional regulator low > 89

Not shown: 66 genomes with orthologs for CSW01_12610 only; 0 genomes with orthologs for CSW01_16835 only