Conservation of cofitness between CSW01_00450 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00450 SCP2 domain-containing protein 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.80 16
Dickeya dianthicola 67-19 0.36 HGI48_RS00900 SCP2 domain-containing protein 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) — —
Dickeya dianthicola ME23 0.36 DZA65_RS00960 SCP2 domain-containing protein 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) — —
Dickeya dadantii 3937 0.36 DDA3937_RS20325 SCP2 domain-containing protein 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4499 Uncharacterized protein conserved in bacteria 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF261 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Erwinia amylovora T8 0.35 OLJFJH_06505 Ubiquinone biosynthesis accessory factor UbiJ 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) — —
Enterobacter sp. TBS_079 0.35 MPMX20_04446 Ubiquinone biosynthesis accessory factor UbiJ 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) — —
Klebsiella michiganensis M5al 0.35 BWI76_RS01310 SCP2 domain-containing protein 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) — —
Serratia liquefaciens MT49 0.34 IAI46_01070 SCP2 domain-containing protein 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 86
Rahnella sp. WP5 0.34 EX31_RS14620 SCP2 domain-containing protein 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Escherichia coli ECRC62 0.34 BNILDI_05100 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli BW25113 0.34 b3834 yigP hypothetical protein (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli BL21 0.34 ECD_03727 aerobic ubiquinone synthesis protein, SCP2 family protein 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli ECOR27 0.34 NOLOHH_06430 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_04217 hypothetical protein 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Erwinia tracheiphila SCR3 0.33 LU632_RS24000 SCP2 domain-containing protein 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli Nissle 1917 0.33 ECOLIN_RS22120 ubiquinone biosynthesis protein UbiJ 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia coli ECRC99 0.33 KEDOAH_13850 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC100 0.33 OKFHMN_14300 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC101 0.33 MCAODC_04805 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR38 0.33 HEPCGN_12930 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia fergusonii Becca 0.33 EFB2_04781 Ubiquinone biosynthesis accessory factor UbiJ 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECRC98 0.33 JDDGAC_17925 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC102 0.33 NIAGMN_12055 ubiJ ubiquinone biosynthesis protein UbiJ 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Pantoea sp. MT58 0.33 IAI47_18280 SCP2 domain-containing protein 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella loihica PV-4 0.31 Shew_3374 hypothetical protein (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.28 HER17_RS20605 SCP2 domain-containing protein 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella oneidensis MR-1 0.28 SO4200 conserved hypothetical protein (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.26 MIT1002_03630 SCP-2 sterol transfer family protein 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] — —
Shewanella sp. ANA-3 0.26 Shewana3_3726 hypothetical protein (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) — —
Shewanella amazonensis SB2B 0.23 Sama_3203 hypothetical protein (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0743 Uncharacterized protein conserved in bacteria 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) low > 40
Pseudomonas stutzeri RCH2 0.15 Psest_3941 Uncharacterized protein conserved in bacteria 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas simiae WCS417 0.13 PS417_01865 sterol-binding protein 0.34 PS417_01210 hypothetical protein — —
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_300 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_1563 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas sp. RS175 0.12 PFR28_04988 Ubiquinone biosynthesis accessory factor UbiJ 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_3780 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Marinobacter adhaerens HP15 0.12 HP15_3192 protein containing sterol-binding domain 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS01910 sterol-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25 0.12 PFLU_RS01910 sterol-binding protein 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas sp. BP01 0.12 JOY50_RS09630 SCP2 domain-containing protein 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84

Not shown: 9 genomes with orthologs for CSW01_00450 only; 28 genomes with orthologs for CSW01_13810 only