| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_04510 | | 50S ribosomal protein L31 type B | 1.0 | CSW01_13525 | | DNA-binding transcriptional regulator CytR | 0.63 | 16 |
| Escherichia coli ECRC99 | 0.69 | KEDOAH_18760 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | KEDOAH_14435 | cytR | DNA-binding transcriptional regulator CytR | — | — |
| Escherichia coli ECOR38 | 0.69 | HEPCGN_07710 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | low | > 87 |
| Escherichia coli ECRC100 | 0.69 | OKFHMN_09190 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | low | > 80 |
| Escherichia coli ECRC62 | 0.69 | BNILDI_00085 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | BNILDI_05660 | cytR | DNA-binding transcriptional regulator CytR | low | > 75 |
| Escherichia coli ECRC98 | 0.69 | JDDGAC_12830 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | JDDGAC_17350 | cytR | DNA-binding transcriptional regulator CytR | low | > 86 |
| Escherichia coli ECRC101 | 0.69 | MCAODC_28405 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | low | > 87 |
| Escherichia fergusonii Becca | 0.69 | EFB2_03748 | | 50S ribosomal protein L31 type B | 0.67 | EFB2_04684 | | HTH-type transcriptional repressor CytR | low | > 86 |
| Escherichia coli ECRC102 | 0.69 | NIAGMN_07245 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | — | — |
| Escherichia coli Nissle 1917 | 0.69 | ECOLIN_RS01925 | | type B 50S ribosomal protein L31 | 0.67 | ECOLIN_RS22650 | | DNA-binding transcriptional regulator CytR | low | > 55 |
| Escherichia coli BL21 | 0.69 | ECD_00255 | | 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein | 0.67 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | low | > 61 |
| Escherichia coli ECOR27 | 0.69 | NOLOHH_01965 | rpmE2-1 | type B 50S ribosomal protein L31 | 0.67 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.69 | OHPLBJKB_03385 | | 50S ribosomal protein L31 type B | 0.67 | OHPLBJKB_04117 | | HTH-type transcriptional repressor CytR | low | > 73 |
| Escherichia coli BW25113 | 0.69 | b0296 | ykgM | 50S ribosomal protein L31 (NCBI) | 0.67 | b3934 | cytR | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS15745 | | type B 50S ribosomal protein L31 | 0.66 | HER17_RS00865 | | DNA-binding transcriptional regulator CytR | low | > 75 |
| Rahnella sp. WP5 | 0.66 | EX31_RS22465 | | type B 50S ribosomal protein L31 | 0.70 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | low | > 89 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_05180 | | type B 50S ribosomal protein L31 | 0.69 | IAI46_24560 | | DNA-binding transcriptional regulator CytR | low | > 86 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_2504 | | ribosomal protein L31 | 0.67 | EX28DRAFT_4407 | | Transcriptional regulators | low | > 76 |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_01056 | | 50S ribosomal protein L31 type B | 0.68 | MPMX20_04535 | | HTH-type transcriptional repressor CytR | low | > 85 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS06110 | | type B 50S ribosomal protein L31 | 0.61 | DZA65_RS21490 | | DNA-binding transcriptional regulator CytR | low | > 75 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS05785 | | type B 50S ribosomal protein L31 | 0.61 | HGI48_RS20445 | | DNA-binding transcriptional regulator CytR | low | > 71 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS05730 | | type B 50S ribosomal protein L31 | 0.61 | DDA3937_RS00930 | | DNA-binding transcriptional regulator CytR | low | > 74 |
| Pantoea sp. MT58 | 0.63 | IAI47_14520 | | type B 50S ribosomal protein L31 | 0.66 | IAI47_00860 | | DNA-binding transcriptional regulator CytR | low | > 76 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS06735 | | 50S ribosomal protein L31 | 0.68 | BWI76_RS00765 | | DNA-binding transcriptional regulator CytR | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.61 | LU632_RS18190 | | type B 50S ribosomal protein L31 | 0.64 | LU632_RS19660 | cytR | DNA-binding transcriptional regulator CytR | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF4373 | | LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent | 0.66 | GFF2316 | | Transcriptional (co)regulator CytR | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS09025 | | 50S ribosomal protein L31 type B | 0.35 | BPHYT_RS04680 | | LacI family transcriptional regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_00824 | | LSU ribosomal protein L31P | 0.34 | H281DRAFT_00103 | | transcriptional regulator, LacI family | — | — |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_002040 | | large subunit ribosomal protein L31 | 0.33 | ABIE53_001217 | | LacI family repressor for deo operon, udp, cdd, tsx, nupC, and nupG | — | — |
| Lysobacter sp. OAE881 | 0.56 | ABIE51_RS17205 | | type B 50S ribosomal protein L31 | 0.26 | ABIE51_RS10155 | | LacI family DNA-binding transcriptional regulator | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS22325 | | type B 50S ribosomal protein L31 | 0.36 | QEN71_RS25305 | | LacI family DNA-binding transcriptional regulator | — | — |
| Erwinia amylovora T8 | 0.54 | OLJFJH_17860 | | type B 50S ribosomal protein L31 | 0.64 | OLJFJH_06075 | | DNA-binding transcriptional regulator CytR | low | > 58 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS13325 | | 50S ribosomal protein L31 | 0.27 | RR42_RS27820 | | GntR family transcriptional regulator | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.52 | Echvi_1739 | | ribosomal protein L31 | 0.28 | Echvi_3495 | | Transcriptional regulators | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS11830 | | type B 50S ribosomal protein L31 | 0.47 | ABZR86_RS01690 | | LacI family DNA-binding transcriptional regulator | — | — |
| Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS13250 | | type B 50S ribosomal protein L31 | 0.24 | HMPREF1181_RS05535 | | LacI family DNA-binding transcriptional regulator | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.49 | HMPREF1058_RS00655 | | type B 50S ribosomal protein L31 | 0.26 | HMPREF1058_RS09530 | | LacI family DNA-binding transcriptional regulator | — | — |
| Phocaeicola dorei CL03T12C01 | 0.49 | ABI39_RS08260 | | type B 50S ribosomal protein L31 | 0.26 | ABI39_RS03985 | | LacI family DNA-binding transcriptional regulator | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.49 | BT1692 | | 50S ribosomal protein L31 type B (NCBI ptt file) | 0.26 | BT3613 | | LacI family transcriptional regulator (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.48 | BACOVA_04437 | | ribosomal protein L31 | 0.25 | BACOVA_03411 | | sugar-binding domain protein | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.1202.1 | | LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent | 0.24 | Xcc-8004.1274.1 | | transcriptional regulator lacI family | — | — |
| Cellulophaga baltica 18 | 0.44 | M666_RS18195 | | type B 50S ribosomal protein L31 | 0.26 | M666_RS10675 | | LacI family DNA-binding transcriptional regulator | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS14465 | | type B 50S ribosomal protein L31 | 0.27 | ABZR88_RS10530 | | LacI family DNA-binding transcriptional regulator | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS10805 | | 50S ribosomal protein L31 | 0.22 | CA265_RS24625 | | LacI family transcriptional regulator | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.42 | GFF4238 | | LSU ribosomal protein L31p | 0.23 | GFF4454 | | Transcriptional regulator, LacI family | — | — |
Not shown: 24 genomes with orthologs for CSW01_04510 only; 21 genomes with orthologs for CSW01_13525 only