Conservation of cofitness between CSW01_10020 and CSW01_13285 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10020 ROK family protein 1.0 CSW01_13285 ribulose-phosphate 3-epimerase 0.89 17
Dickeya dadantii 3937 0.50 DDA3937_RS10675 ROK family transcriptional regulator 0.75 DDA3937_RS19530 ribulose-phosphate 3-epimerase — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS10735 ROK family transcriptional regulator 0.76 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Serratia liquefaciens MT49 0.50 IAI46_11685 ROK family transcriptional regulator 0.76 IAI46_23685 ribulose-phosphate 3-epimerase low > 87
Rahnella sp. WP5 0.50 EX31_RS16985 ROK family transcriptional regulator 0.74 EX31_RS04705 ribulose-phosphate 3-epimerase — —
Dickeya dianthicola ME23 0.49 DZA65_RS11145 ROK family transcriptional regulator 0.76 DZA65_RS20745 ribulose-phosphate 3-epimerase — —
Dickeya dianthicola 67-19 0.49 HGI48_RS10675 ROK family transcriptional regulator 0.76 HGI48_RS19660 ribulose-phosphate 3-epimerase — —
Klebsiella pneumoniae MKP103 0.48 KDGMDA_21230 transcriptional regulator 0.78 KDGMDA_06895 ribulose-phosphate 3-epimerase — —
Erwinia amylovora T8 0.48 OLJFJH_14275 transcriptional regulator 0.76 OLJFJH_04075 ribulose-phosphate 3-epimerase — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase 0.78 EX28DRAFT_4156 ribulose-phosphate 3-epimerase low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_02063 Protein mlc 0.77 MPMX20_04275 Ribulose-phosphate 3-epimerase low > 85
Erwinia tracheiphila SCR3 0.47 LU632_RS12305 ROK family transcriptional regulator 0.76 LU632_RS22850 rpe ribulose-phosphate 3-epimerase — —
Klebsiella michiganensis M5al 0.47 BWI76_RS15955 transcriptional regulator 0.77 BWI76_RS26070 ribulose-phosphate 3-epimerase — —
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_23280 transcriptional regulator 0.76 IJEDHG_12050 rpe ribulose-phosphate 3-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon 0.76 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 78
Escherichia coli ECOR38 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc 0.77 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 88
Escherichia coli ECRC98 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc 0.77 JDDGAC_20760 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC100 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc 0.77 OKFHMN_17130 dam adenine-specific DNA-methyltransferase — —
Escherichia fergusonii Becca 0.47 EFB2_02398 Protein mlc 0.77 EFB2_00442 Ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC102 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc 0.77 NIAGMN_14900 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC99 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc 0.77 KEDOAH_11010 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECOR27 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc 0.77 NOLOHH_08920 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC101 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc 0.77 MCAODC_07660 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC62 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc 0.77 BNILDI_02600 dam adenine-specific DNA-methyltransferase — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc 0.77 ECOLIN_RS19345 ribulose-phosphate 3-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02132 Protein mlc 0.77 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase — —
Escherichia coli BW25113 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) 0.77 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor 0.77 ECD_03238 D-ribulose-5-phosphate 3-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS06405 ROK family transcriptional regulator 0.76 PagCFBP13505_RS21685 ribulose-phosphate 3-epimerase — —
Pantoea sp. MT58 0.45 IAI47_09750 ROK family transcriptional regulator 0.76 IAI47_01910 ribulose-phosphate 3-epimerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_08710 sugar kinase 0.42 CA264_21180 ribulose-phosphate 3-epimerase low > 74
Phaeobacter inhibens DSM 17395 0.19 PGA1_262p00420 Transcriptional regulator/sugar kinase 0.42 PGA1_c04170 ribulose-phosphate 3-epimerase Rpe — —
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator 0.39 HMPREF1078_RS00800 ribulose-phosphate 3-epimerase — —
Bifidobacterium breve UCC2003 0.18 BBR_RS16880 ROK family transcriptional regulator 0.38 BBR_RS15800 ribulose-phosphate 3-epimerase — —
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS07285 ROK family transcriptional regulator 0.42 HMPREF1058_RS07710 ribulose-phosphate 3-epimerase — —
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS21185 ROK family transcriptional regulator 0.41 ABI39_RS00225 ribulose-phosphate 3-epimerase — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_01791 hypothetical protein 0.40 BACOVA_01203 ribulose-phosphate 3-epimerase — —
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS04110 ROK family transcriptional regulator 0.39 HMPREF1181_RS06505 ribulose-phosphate 3-epimerase low > 56
Variovorax sp. OAS795 0.17 ABID97_RS00440 ROK family protein 0.59 ABID97_RS04905 ribulose-phosphate 3-epimerase — —
Azospirillum brasilense Sp245 0.17 AZOBR_RS27950 transcriptional regulator 0.45 AZOBR_RS06755 ribulose-phosphate 3-epimerase — —
Bacteroides thetaiotaomicron VPI-5482 0.17 BT0433 putative xylose repressor (NCBI ptt file) 0.40 BT3946 ribulose-phosphate 3-epimerase (NCBI ptt file) — —
Sinorhizobium meliloti 1021 0.15 SMa2303 ROK family transcriptional regulator 0.44 SMc00511 D-ribulose-5-phosphate 3-epimerase low > 103
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS19180 ROK family transcriptional regulator 0.71 ABZR86_RS12200 ribulose-phosphate 3-epimerase low > 74
Caulobacter crescentus NA1000 0.09 CCNA_01870 NagC-family transcriptional regulator 0.44 CCNA_00100 Ribulose-5-phosphate 3-epimerase — —
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01870 NagC-family transcriptional regulator 0.44 CCNA_00100 Ribulose-5-phosphate 3-epimerase — —

Not shown: 1 genomes with orthologs for CSW01_10020 only; 78 genomes with orthologs for CSW01_13285 only