Conservation of cofitness between CSW01_00205 and CSW01_13225 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00205 hemolysin III family protein 1.0 CSW01_13225 phosphoribulokinase 0.49 18
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2950 channel protein, hemolysin III family 0.74 EX28DRAFT_4174 Phosphoribulokinase low > 76
Klebsiella michiganensis M5al 0.76 BWI76_RS23840 hemolysin III family protein 0.76 BWI76_RS25975 phosphoribulokinase low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03758 hypothetical protein 0.74 MPMX20_04258 Phosphoribulokinase, plasmid low > 85
Klebsiella pneumoniae MKP103 0.76 KDGMDA_04325 hemolysin III family protein 0.75 KDGMDA_06810 phosphoribulokinase low > 95
Dickeya dadantii 3937 0.74 DDA3937_RS03270 hemolysin III family protein 0.74 DDA3937_RS19435 phosphoribulokinase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.75 GFF3714 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown low > 78
Escherichia coli ECOR27 0.73 NOLOHH_11465 yqfA hemolysin III family protein 0.76 NOLOHH_09050 prkB phosphoribulokinase low > 76
Escherichia coli BL21 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein 0.75 ECD_03206 putative phosphoribulokinase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00816 hypothetical protein 0.75 OHPLBJKB_00347 Phosphoribulokinase, plasmid low > 74
Escherichia coli ECOR38 0.73 HEPCGN_18835 yqfA hemolysin III family protein 0.75 HEPCGN_16075 prkB phosphoribulokinase low > 88
Escherichia coli ECRC98 0.73 JDDGAC_23185 yqfA hemolysin III family protein 0.75 JDDGAC_20880 prkB phosphoribulokinase low > 87
Escherichia fergusonii Becca 0.73 EFB2_01002 hypothetical protein 0.75 EFB2_00467 Phosphoribulokinase, plasmid low > 86
Escherichia coli ECRC99 0.73 KEDOAH_08595 yqfA hemolysin III family protein 0.75 KEDOAH_10890 prkB phosphoribulokinase — —
Escherichia coli ECRC62 0.73 BNILDI_10000 yqfA hemolysin III family protein 0.75 BNILDI_02470 prkB phosphoribulokinase low > 75
Escherichia coli ECRC100 0.73 OKFHMN_19545 yqfA hemolysin III family protein 0.75 OKFHMN_17250 prkB phosphoribulokinase low > 79
Escherichia coli BW25113 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.75 b3355 prkB predicted phosphoribulokinase (NCBI) low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16150 hemolysin III family protein 0.76 ECOLIN_RS19215 phosphoribulokinase low > 55
Escherichia coli ECRC102 0.73 NIAGMN_17310 yqfA hemolysin III family protein 0.75 NIAGMN_15020 prkB phosphoribulokinase low > 80
Escherichia coli ECRC101 0.73 MCAODC_10065 yqfA hemolysin III family protein 0.75 MCAODC_07780 prkB phosphoribulokinase low > 87
Serratia liquefaciens MT49 0.72 IAI46_20775 hemolysin III family protein 0.76 IAI46_23570 phosphoribulokinase low > 87
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS15905 hemolysin III family protein 0.75 PagCFBP13505_RS21605 phosphoribulokinase low > 74
Rahnella sp. WP5 0.69 EX31_RS21610 hemolysin III family protein 0.75 EX31_RS04610 phosphoribulokinase low > 89
Dickeya dianthicola 67-19 0.68 HGI48_RS03410 hemolysin III family protein 0.74 HGI48_RS19555 phosphoribulokinase low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS03455 hemolysin III family protein 0.74 DZA65_RS20640 phosphoribulokinase low > 75
Pantoea sp. MT58 0.67 IAI47_03795 hemolysin III family protein 0.75 IAI47_01975 phosphoribulokinase low > 76
Pectobacterium carotovorum WPP14 0.64 HER17_RS17935 hemolysin III family protein 0.74 HER17_RS01925 phosphoribulokinase low > 75
Erwinia amylovora T8 0.64 OLJFJH_08800 hemolysin III family protein 0.74 OLJFJH_04010 phosphoribulokinase low > 58
Alteromonas macleodii MIT1002 0.52 MIT1002_00886 hemolysin 0.70 MIT1002_03965 Phosphoribulokinase, plasmid low > 70
Shewanella oneidensis MR-1 0.48 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) 0.70 SO0878 prkB phosphoribulokinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.48 Shew_2098 hemolysin III family channel protein (RefSeq) 0.70 Shew_0587 phosphoribulokinase (RefSeq) low > 60
Shewanella sp. ANA-3 0.46 Shewana3_1934 hemolysin III family channel protein (RefSeq) 0.71 Shewana3_3400 phosphoribulokinase/uridine kinase (RefSeq) low > 73
Marinobacter adhaerens HP15 0.44 HP15_2974 channel protein, hemolysin III family 0.54 HP15_3311 phosphoribulokinase low > 73
Shewanella amazonensis SB2B 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) 0.68 Sama_3002 phosphoribulokinase (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS02270 hemolysin III family protein 0.56 QEN71_RS34120 phosphoribulokinase low > 153
Paraburkholderia graminis OAS925 0.38 ABIE53_003461 hemolysin III 0.54 ABIE53_005500 phosphoribulokinase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04221 hemolysin III 0.53 H281DRAFT_01313 phosphoribulokinase low > 103
Variovorax sp. OAS795 0.36 ABID97_RS07605 hemolysin III family protein 0.59 ABID97_RS12880 phosphoribulokinase low > 91
Sinorhizobium meliloti 1021 0.34 SMc00455 hypothetical protein 0.52 SM_b20201 phosphoribulokinase low > 103
Rhodospirillum rubrum S1H 0.30 Rru_A0661 Hly-III related proteins (NCBI) 0.56 Rru_A2404 Phosphoribulokinase (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.30 TX73_008140 hemolysin III family protein 0.56 TX73_024115 phosphoribulokinase — —
Azospirillum sp. SherDot2 0.29 MPMX19_02364 hypothetical protein 0.57 MPMX19_02943 Phosphoribulokinase, chromosomal low > 112

Not shown: 52 genomes with orthologs for CSW01_00205 only; 6 genomes with orthologs for CSW01_13225 only