Conservation of cofitness between CSW01_14440 and CSW01_12960 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14440 redox-sensitive transcriptional activator SoxR 1.0 CSW01_12960 sulfate adenylyltransferase subunit CysD 0.46 12
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_6074 Redox-sensitive transcriptional activator SoxR 0.73 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_20930 MerR family transcriptional regulator 0.73 AO356_16665 sulfate adenylyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_2312 Redox-sensitive transcriptional activator SoxR 0.73 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1627.1 Redox-sensitive transcriptional activator SoxR 0.66 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) — —
Azospirillum sp. SherDot2 0.52 MPMX19_05872 Redox-sensitive transcriptional activator SoxR 0.69 MPMX19_06719 Sulfate adenylyltransferase subunit 2 low > 112
Pseudomonas sp. RS175 0.52 PFR28_02914 Redox-sensitive transcriptional activator SoxR 0.73 PFR28_00193 Sulfate adenylyltransferase subunit 2 low > 88
Pseudomonas sp. S08-1 0.52 OH686_20615 redox-sensitive transcriptional activator SoxR 0.73 OH686_08450 Sulfate adenylyltransferase subunit 2 — —
Lysobacter sp. OAE881 0.52 ABIE51_RS11265 redox-sensitive transcriptional activator SoxR 0.66 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD low > 62
Pseudomonas sp. DMC3 0.51 GFF4533 Redox-sensitive transcriptional activator SoxR 0.72 GFF1848 Sulfate adenylyltransferase subunit 2 low > 89
Azospirillum brasilense Sp245 0.51 AZOBR_RS31925 MerR family transcriptional regulator 0.61 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 low > 97
Sinorhizobium meliloti 1021 0.50 SMc00182 transcriptional regulator 0.67 SMc00091 sulfate adenylyltransferase — —
Rhizobium sp. OAE497 0.50 ABIE40_RS17890 redox-sensitive transcriptional activator SoxR 0.66 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD low > 107
Agrobacterium fabrum C58 0.50 Atu3915 MerR family transcriptional regulator 0.67 Atu0817 sulfate adenylate transferase, subunit 2 low > 89
Pseudomonas simiae WCS417 0.50 PS417_09440 MerR family transcriptional regulator 0.73 PS417_03715 sulfate adenylyltransferase subunit 2 — —
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_02110 Redox-sensitive transcriptional activator SoxR 0.73 GEMAOFIL_00949 Sulfate adenylyltransferase subunit 2 low > 93
Pseudomonas aeruginosa PA14 0.50 IKLFDK_11155 redox-sensitive transcriptional activator SoxR 0.73 IKLFDK_01875 sulfate adenylyltransferase subunit CysD low > 100
Pseudomonas fluorescens SBW25 0.50 PFLU_RS10090 redox-sensitive transcriptional activator SoxR 0.73 PFLU_RS03765 sulfate adenylyltransferase subunit CysD low > 109
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS10090 redox-sensitive transcriptional activator SoxR 0.73 PFLU_RS03765 sulfate adenylyltransferase subunit CysD low > 109
Erwinia amylovora T8 0.49 OLJFJH_03385 redox-sensitive transcriptional activator SoxR 0.79 OLJFJH_09325 sulfate adenylyltransferase subunit CysD low > 58
Escherichia coli BW25113 0.48 b4063 soxR DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) 0.80 b2752 cysD sulfate adenylyltransferase subunit 2 (NCBI) low > 76
Escherichia coli ECRC101 0.48 MCAODC_03380 soxR redox-sensitive transcriptional activator SoxR 0.80 MCAODC_10965 cysD sulfate adenylyltransferase subunit CysD low > 88
Escherichia coli ECRC98 0.48 JDDGAC_16505 soxR redox-sensitive transcriptional activator SoxR 0.80 JDDGAC_24105 cysD sulfate adenylyltransferase subunit CysD low > 87
Escherichia coli ECRC102 0.48 NIAGMN_10715 soxR redox-sensitive transcriptional activator SoxR 0.80 NIAGMN_18210 cysD sulfate adenylyltransferase subunit CysD low > 80
Escherichia coli ECRC99 0.48 KEDOAH_15280 soxR redox-sensitive transcriptional activator SoxR 0.80 KEDOAH_07700 cysD sulfate adenylyltransferase subunit CysD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03978 Redox-sensitive transcriptional activator SoxR 0.80 OHPLBJKB_00981 Sulfate adenylyltransferase subunit 2 low > 74
Escherichia coli ECRC100 0.48 OKFHMN_12870 soxR redox-sensitive transcriptional activator SoxR 0.80 OKFHMN_20440 cysD sulfate adenylyltransferase subunit CysD low > 79
Escherichia coli BL21 0.48 ECD_03935 redox-sensitive transcriptional activator of soxS; autorepressor 0.80 ECD_02602 sulfate adenylyltransferase, subunit 2 low > 61
Escherichia coli ECRC62 0.48 BNILDI_06405 soxR redox-sensitive transcriptional activator SoxR 0.80 BNILDI_10805 cysD sulfate adenylyltransferase subunit CysD low > 75
Escherichia coli ECOR27 0.48 NOLOHH_05120 soxR redox-sensitive transcriptional activator SoxR 0.80 NOLOHH_12255 cysD sulfate adenylyltransferase subunit CysD low > 76
Klebsiella michiganensis M5al 0.48 BWI76_RS02000 transcriptional regulator 0.82 BWI76_RS22700 sulfate adenylyltransferase subunit 2 low > 92
Escherichia coli Nissle 1917 0.48 ECOLIN_RS23510 redox-sensitive transcriptional activator SoxR 0.80 ECOLIN_RS15385 sulfate adenylyltransferase subunit CysD low > 55
Pseudomonas sp. BP01 0.48 JOY50_RS22275 soxR redox-sensitive transcriptional activator SoxR 0.74 JOY50_RS15275 cysD sulfate adenylyltransferase subunit CysD low > 84
Escherichia fergusonii Becca 0.48 EFB2_04528 Redox-sensitive transcriptional activator SoxR 0.80 EFB2_01158 Sulfate adenylyltransferase subunit 2 low > 86
Klebsiella pneumoniae MKP103 0.48 KDGMDA_10490 redox-sensitive transcriptional activator SoxR 0.82 KDGMDA_03275 sulfate adenylyltransferase subunit CysD low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF1442 Redox-sensitive transcriptional activator SoxR 0.80 GFF4800 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 78
Escherichia coli ECOR38 0.48 HEPCGN_11485 soxR redox-sensitive transcriptional activator SoxR 0.80 HEPCGN_19620 cysD sulfate adenylyltransferase subunit CysD low > 88
Acinetobacter baumannii LAC-4 0.48 RR41_RS10770 redox-sensitive transcriptional activator SoxR 0.80 RR41_RS08930 sulfate adenylyltransferase subunit CysD low > 55
Enterobacter sp. TBS_079 0.48 MPMX20_00282 Redox-sensitive transcriptional activator SoxR 0.82 MPMX20_03638 Sulfate adenylyltransferase subunit 2 low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4241 redox-sensitive transcriptional activator SoxR 0.82 EX28DRAFT_2848 sulfate adenylyltransferase, small subunit low > 76
Pseudomonas putida KT2440 0.47 PP_2060 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent 0.74 PP_1303 Sulfate adenylyltransferase subunit 2 low > 96
Pseudomonas sp. SVBP6 0.47 COO64_RS19440 soxR redox-sensitive transcriptional activator SoxR 0.73 COO64_RS11725 cysD sulfate adenylyltransferase subunit CysD low > 93
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_4171 redox-sensitive transcriptional activator SoxR 0.64 Ga0059261_4042 sulfate adenylyltransferase, small subunit low > 68
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS28190 MerR family transcriptional regulator 0.38 RR42_RS16255 sulfate adenylyltransferase low > 128
Acidovorax sp. GW101-3H11 0.21 Ac3H11_3586 Transcriptional regulator, MerR family 0.39 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) low > 79

Not shown: 0 genomes with orthologs for CSW01_14440 only; 66 genomes with orthologs for CSW01_12960 only