Conservation of cofitness between CSW01_14440 and CSW01_11355 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14440 redox-sensitive transcriptional activator SoxR 1.0 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.45 15
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_6074 Redox-sensitive transcriptional activator SoxR 0.58 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_20930 MerR family transcriptional regulator 0.58 AO356_19085 phosphoribosylglycinamide formyltransferase low > 104
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_2312 Redox-sensitive transcriptional activator SoxR 0.56 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1627.1 Redox-sensitive transcriptional activator SoxR 0.42 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Azospirillum sp. SherDot2 0.52 MPMX19_05872 Redox-sensitive transcriptional activator SoxR 0.40 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Pseudomonas sp. RS175 0.52 PFR28_02914 Redox-sensitive transcriptional activator SoxR 0.58 PFR28_03218 Phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas sp. S08-1 0.52 OH686_20615 redox-sensitive transcriptional activator SoxR 0.58 OH686_18990 phosphoribosylglycinamide formyltransferase low > 80
Lysobacter sp. OAE881 0.52 ABIE51_RS11265 redox-sensitive transcriptional activator SoxR 0.40 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase low > 62
Pseudomonas sp. DMC3 0.51 GFF4533 Redox-sensitive transcriptional activator SoxR 0.58 GFF2538 Phosphoribosylglycinamide formyltransferase low > 89
Azospirillum brasilense Sp245 0.51 AZOBR_RS31925 MerR family transcriptional regulator 0.41 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase low > 97
Sinorhizobium meliloti 1021 0.50 SMc00182 transcriptional regulator 0.39 SMc00614 phosphoribosylglycinamide formyltransferase — —
Rhizobium sp. OAE497 0.50 ABIE40_RS17890 redox-sensitive transcriptional activator SoxR 0.42 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase low > 107
Agrobacterium fabrum C58 0.50 Atu3915 MerR family transcriptional regulator 0.39 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase low > 89
Pseudomonas aeruginosa PA14 0.50 IKLFDK_11155 redox-sensitive transcriptional activator SoxR 0.57 IKLFDK_04255 phosphoribosylglycinamide formyltransferase — —
Pseudomonas simiae WCS417 0.50 PS417_09440 MerR family transcriptional regulator 0.59 PS417_20125 phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas aeruginosa MRSN321 0.50 DY961_RS17750 soxR;go_function=DNA redox-sensitive transcriptional activator SoxR 0.57 DY961_RS07720 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase low > 100
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_02110 Redox-sensitive transcriptional activator SoxR 0.60 GEMAOFIL_04218 Phosphoribosylglycinamide formyltransferase low > 96
Pseudomonas aeruginosa PUPa3 0.50 DQ20_RS39975 soxR;go_function=DNA redox-sensitive transcriptional activator SoxR 0.57 DQ20_RS45075 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase low > 101
Pseudomonas orientalis W4I3 0.50 QF045_RS12070 redox-sensitive transcriptional activator SoxR 0.57 QF045_RS22220 phosphoribosylglycinamide formyltransferase low > 93
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS10090 redox-sensitive transcriptional activator SoxR 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS10090 redox-sensitive transcriptional activator SoxR 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Erwinia amylovora T8 0.49 OLJFJH_03385 redox-sensitive transcriptional activator SoxR 0.62 OLJFJH_10585 phosphoribosylglycinamide formyltransferase low > 58
Escherichia coli ECRC102 0.48 NIAGMN_10715 soxR redox-sensitive transcriptional activator SoxR 0.64 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase low > 80
Escherichia coli ECRC100 0.48 OKFHMN_12870 soxR redox-sensitive transcriptional activator SoxR 0.64 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase low > 79
Escherichia coli ECRC99 0.48 KEDOAH_15280 soxR redox-sensitive transcriptional activator SoxR 0.65 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli BW25113 0.48 b4063 soxR DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) 0.65 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Escherichia coli BL21 0.48 ECD_03935 redox-sensitive transcriptional activator of soxS; autorepressor 0.65 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 61
Escherichia coli ECRC62 0.48 BNILDI_06405 soxR redox-sensitive transcriptional activator SoxR 0.65 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase low > 75
Escherichia coli ECRC101 0.48 MCAODC_03380 soxR redox-sensitive transcriptional activator SoxR 0.64 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase low > 87
Escherichia coli ECOR27 0.48 NOLOHH_05120 soxR redox-sensitive transcriptional activator SoxR 0.65 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03978 Redox-sensitive transcriptional activator SoxR 0.65 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 74
Escherichia coli ECRC98 0.48 JDDGAC_16505 soxR redox-sensitive transcriptional activator SoxR 0.64 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase low > 87
Escherichia coli ECOR38 0.48 HEPCGN_11485 soxR redox-sensitive transcriptional activator SoxR 0.65 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 88
Escherichia fergusonii Becca 0.48 EFB2_04528 Redox-sensitive transcriptional activator SoxR 0.65 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Klebsiella michiganensis M5al 0.48 BWI76_RS02000 transcriptional regulator 0.64 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Escherichia coli Nissle 1917 0.48 ECOLIN_RS23510 redox-sensitive transcriptional activator SoxR 0.65 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 55
Pseudomonas sp. BP01 0.48 JOY50_RS22275 soxR redox-sensitive transcriptional activator SoxR 0.58 JOY50_RS23935 purN phosphoribosylglycinamide formyltransferase low > 84
Klebsiella pneumoniae MKP103 0.48 KDGMDA_10490 redox-sensitive transcriptional activator SoxR 0.63 KDGMDA_27810 phosphoribosylglycinamide formyltransferase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF1442 Redox-sensitive transcriptional activator SoxR 0.64 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Acinetobacter baumannii LAC-4 0.48 RR41_RS10770 redox-sensitive transcriptional activator SoxR 0.46 RR41_RS04590 phosphoribosylglycinamide formyltransferase low > 55
Enterobacter sp. TBS_079 0.48 MPMX20_00282 Redox-sensitive transcriptional activator SoxR 0.65 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4241 redox-sensitive transcriptional activator SoxR 0.65 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Pseudomonas putida KT2440 0.47 PP_2060 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent 0.59 PP_1664 phosphoribosylglycinamide formyltransferase 1 low > 96
Pseudomonas sp. SVBP6 0.47 COO64_RS19440 soxR redox-sensitive transcriptional activator SoxR 0.58 COO64_RS07300 purN phosphoribosylglycinamide formyltransferase low > 93
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_4171 redox-sensitive transcriptional activator SoxR 0.35 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 68
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS28190 MerR family transcriptional regulator 0.45 RR42_RS17050 phosphoribosylglycinamide formyltransferase low > 128
Acidovorax sp. GW101-3H11 0.21 Ac3H11_3586 Transcriptional regulator, MerR family 0.42 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —

Not shown: 0 genomes with orthologs for CSW01_14440 only; 69 genomes with orthologs for CSW01_11355 only