Conservation of cofitness between CSW01_09950 and CSW01_10260 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09950 signal peptide peptidase SppA 1.0 CSW01_10260 thiol:disulfide interchange protein DsbE 0.65 18
Serratia liquefaciens MT49 0.45 IAI46_14325 signal peptide peptidase SppA 0.65 IAI46_18080 DsbE family thiol:disulfide interchange protein low > 87
Klebsiella pneumoniae MKP103 0.45 KDGMDA_19255 signal peptide peptidase SppA 0.65 KDGMDA_23840 DsbE family thiol:disulfide interchange protein low > 95
Pectobacterium carotovorum WPP14 0.44 HER17_RS11105 signal peptide peptidase SppA 0.63 HER17_RS09060 DsbE family thiol:disulfide interchange protein low > 75
Escherichia coli ECOR38 0.44 HEPCGN_05185 sppA signal peptide peptidase SppA 0.68 HEPCGN_22575 dsbE thiol:disulfide interchange protein DsbE low > 88
Escherichia coli Nissle 1917 0.44 ECOLIN_RS09855 signal peptide peptidase SppA 0.69 ECOLIN_RS12830 thiol:disulfide interchange protein DsbE — —
Escherichia fergusonii Becca 0.44 EFB2_02228 Protease 4 0.69 EFB2_01661 Thiol:disulfide interchange protein DsbE low > 86
Escherichia coli ECRC62 0.43 BNILDI_16110 sppA signal peptide peptidase SppA 0.69 BNILDI_13805 dsbE thiol:disulfide interchange protein DsbE low > 75
Escherichia coli ECOR27 0.43 NOLOHH_17325 sppA signal peptide peptidase SppA 0.69 NOLOHH_14885 dsbE thiol:disulfide interchange protein DsbE low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01966 Protease 4 0.69 OHPLBJKB_01516 Thiol:disulfide interchange protein DsbE low > 74
Escherichia coli BL21 0.43 ECD_01735 protease IV (signal peptide peptidase) 0.69 ECD_02122 periplasmic thioredoxin of cytochrome c-type biogenesis low > 61
Escherichia coli BW25113 0.43 b1766 sppA protease IV (signal peptide peptidase) (NCBI) 0.69 b2195 ccmG periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) low > 76
Rahnella sp. WP5 0.43 EX31_RS06305 signal peptide peptidase SppA 0.62 EX31_RS19740 DsbE family thiol:disulfide interchange protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3483 Signal peptide peptidase SppA (EC 3.4.21.-) 0.61 GFF4876 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase — —
Shewanella sp. ANA-3 0.43 Shewana3_1964 signal peptide peptidase SppA, 67K type (RefSeq) 0.45 Shewana3_0235 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) low > 73
Escherichia coli ECRC100 0.42 OKFHMN_26815 sppA signal peptide peptidase SppA 0.69 OKFHMN_23310 dsbE thiol:disulfide interchange protein DsbE low > 79
Escherichia coli ECRC102 0.42 NIAGMN_01250 sppA signal peptide peptidase SppA 0.69 NIAGMN_21075 dsbE thiol:disulfide interchange protein DsbE low > 80
Escherichia coli ECRC98 0.42 JDDGAC_01390 sppA signal peptide peptidase SppA 0.69 JDDGAC_27270 dsbE thiol:disulfide interchange protein DsbE low > 87
Escherichia coli ECRC101 0.42 MCAODC_18595 sppA signal peptide peptidase SppA 0.69 MCAODC_14360 dsbE thiol:disulfide interchange protein DsbE low > 87
Escherichia coli ECRC99 0.42 KEDOAH_01295 sppA signal peptide peptidase SppA 0.69 KEDOAH_04875 dsbE thiol:disulfide interchange protein DsbE — —
Shewanella oneidensis MR-1 0.42 SO2420 sppA signal peptide peptidase SppA, 67K type (NCBI ptt file) 0.46 SO0267 dsbE thiol:disulfide interchange protein DsbE (NCBI ptt file) low > 76
Erwinia amylovora T8 0.42 OLJFJH_13245 signal peptide peptidase SppA 0.63 OLJFJH_11105 DsbE family thiol:disulfide interchange protein low > 58
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS02805 signal peptide peptidase SppA 0.66 PagCFBP13505_RS00050 DsbE family thiol:disulfide interchange protein low > 74
Pantoea sp. MT58 0.42 IAI47_08970 signal peptide peptidase SppA 0.67 IAI47_06095 DsbE family thiol:disulfide interchange protein low > 76
Shewanella loihica PV-4 0.41 Shew_1941 signal peptide peptidase SppA, 67K type (RefSeq) 0.45 Shew_0194 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) — —
Shewanella amazonensis SB2B 0.40 Sama_1723 signal peptide peptidase SppA, 67K type (RefSeq) 0.47 Sama_0249 thiol:disulfide interchange protein DsbE (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.40 MIT1002_01840 Protease 4 0.36 MIT1002_00966 Cytochrome c biogenesis protein CcmG — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_1578 signal peptide peptidase SppA, 67K type 0.44 B158DRAFT_1329 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily low > 40
Lysobacter sp. OAE881 0.30 ABIE51_RS02175 signal peptide peptidase SppA 0.36 ABIE51_RS08695 DsbE family thiol:disulfide interchange protein low > 62
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03985 signal peptide peptidase SppA 0.38 LRK53_RS12735 DsbE family thiol:disulfide interchange protein — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS12520 signal peptide peptidase SppA 0.35 ABZR86_RS06450 DsbE family thiol:disulfide interchange protein — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS10795 signal peptide peptidase SppA 0.37 LRK55_RS15810 DsbE family thiol:disulfide interchange protein — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11090 signal peptide peptidase SppA 0.37 LRK54_RS16060 DsbE family thiol:disulfide interchange protein — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12785 sppA signal peptide peptidase SppA 0.36 OKGIIK_08590 bcp DsbE family thiol:disulfide interchange protein — —
Sphingobium sp. HT1-2 0.28 GFF1301 Signal peptide peptidase SppA (protease 4) 0.27 GFF84 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase — —
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1351 signal peptide peptidase SppA, 67K type 0.26 Ga0059261_0171 Thiol-disulfide isomerase and thioredoxins low > 68
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00976 signal peptide peptidase A 0.28 CCNA_03788 thiol:disulfide interchange protein tlpA low > 67
Caulobacter crescentus NA1000 0.17 CCNA_00976 signal peptide peptidase A 0.28 CCNA_03788 thiol:disulfide interchange protein tlpA low > 66
Azospirillum brasilense Sp245 0.16 AZOBR_RS10750 protease IV 0.32 AZOBR_RS00745 thiol oxidoreductase DsbE — —
Magnetospirillum magneticum AMB-1 0.16 AMB_RS08065 serine protease 0.29 AMB_RS21255 DsbE family thiol:disulfide interchange protein — —
Rhodospirillum rubrum S1H 0.16 Rru_A2621 Peptidase S49 (NCBI) 0.33 Rru_A0034 Periplasmic protein thiol-disulfide oxidoreductase DsbE (NCBI) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS01460 signal peptide peptidase SppA 0.29 A4249_RS12795 DsbE family thiol:disulfide interchange protein low > 48
Azospirillum sp. SherDot2 0.16 MPMX19_00798 Protease 4 0.30 MPMX19_02534 Thiol:disulfide interchange protein DsbE — —
Fusobacterium nucleatum SB010 0.15 HUW76_03895 signal peptide peptidase SppA 0.14 HUW76_06500 TlpA family protein disulfide reductase 0.96 16

Not shown: 21 genomes with orthologs for CSW01_09950 only; 35 genomes with orthologs for CSW01_10260 only