Conservation of cofitness between CSW01_19005 and CSW01_07140 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19005 amino acid ABC transporter substrate-binding protein 1.0 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein 0.48 5
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU2409 bacterial extracellular solute-binding proteins, family 3 (TIGR) 0.43 DVU0095 potD-1 polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) low > 55
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28035 transporter substrate-binding domain-containing protein 0.28 PFLU_RS28770 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28035 transporter substrate-binding domain-containing protein 0.28 PFLU_RS28770 polyamine ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2409 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.28 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas simiae WCS417 0.32 PS417_26385 amino acid ABC transporter substrate-binding protein 0.28 PS417_27120 ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4670 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.29 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13745 amino acid ABC transporter substrate-binding protein 0.28 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) low > 104
Pseudomonas orientalis W4I3 0.32 QF045_RS00770 transporter substrate-binding domain-containing protein 0.28 QF045_RS01495 polyamine ABC transporter substrate-binding protein low > 93
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1075 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.28 PfGW456L13_3222 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_07865 amino acid ABC transporter substrate-binding protein 0.28 AO353_24775 ABC transporter substrate-binding protein low > 101
Pseudomonas sp. SVBP6 0.31 COO64_RS17605 ABC transporter substrate-binding protein 0.27 COO64_RS00885 polyamine ABC transporter substrate-binding protein low > 93
Pseudomonas sp. S08-1 0.31 OH686_14765 ABC-type amino acid transport/signal transduction system, periplasmic component/domain 0.29 OH686_11460 Putrescine ABC transporter putrescine-binding protein PotF low > 80
Pseudomonas sp. DMC3 0.31 GFF145 hypothetical protein 0.29 GFF2732 Spermidine-binding periplasmic protein SpuE low > 89
Pseudomonas sp. RS175 0.31 PFR28_04175 hypothetical protein 0.30 PFR28_04294 Spermidine-binding periplasmic protein SpuE low > 88
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_05403 hypothetical protein 0.29 GEMAOFIL_05564 Spermidine-binding periplasmic protein SpuE low > 96
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family 0.27 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family 0.27 Psyr_4865 extracellular solute-binding protein, family 1 low > 86
Pseudomonas aeruginosa PA14 0.29 IKLFDK_23165 amino acid ABC transporter substrate-binding protein 0.29 IKLFDK_23950 Spermidine-binding periplasmic protein SpuE low > 98
Pseudomonas putida KT2440 0.29 PP_4955 conserved exported protein of unknown function 0.28 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit low > 96
Pseudomonas aeruginosa PUPa3 0.29 DQ20_RS37065 transporter substrate-binding domain-containing protein 0.29 DQ20_RS37835 spuE;inference=COORDINATES spermidine-binding protein SpuE low > 101
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS22255 transporter substrate-binding domain-containing protein 0.29 DY961_RS21450 spuE;inference=COORDINATES spermidine-binding protein SpuE low > 100
Pseudomonas sp. BP01 0.28 JOY50_RS09920 ABC transporter substrate-binding protein 0.28 JOY50_RS22345 polyamine ABC transporter substrate-binding protein low > 84
Pseudomonas stutzeri RCH2 0.23 Psest_0342 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.28 Psest_4284 Spermidine/putrescine-binding periplasmic protein low > 67
Shewanella loihica PV-4 0.20 Shew_3070 extracellular solute-binding protein (RefSeq) 0.28 Shew_0973 extracellular solute-binding protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.19 SO0056 transporter, putative (NCBI ptt file) 0.29 SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.19 Sama_1011 hypothetical protein (RefSeq) 0.26 Sama_2642 polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) low > 62
Azospirillum sp. SherDot2 0.18 MPMX19_04955 hypothetical protein 0.18 MPMX19_04883 Spermidine-binding periplasmic protein SpuE low > 112
Pseudomonas segetis P6 0.17 ACVTMO_RS07105 substrate-binding periplasmic protein 0.28 ACVTMO_RS02690 polyamine ABC transporter substrate-binding protein low > 75
Shewanella sp. ANA-3 0.17 Shewana3_1085 hypothetical protein (RefSeq) 0.30 Shewana3_3097 extracellular solute-binding protein (RefSeq) low > 73
Marinobacter adhaerens HP15 0.16 HP15_2907 extracellular solute-binding protein, family 3 0.48 HP15_4065 spermidine/putrescine ABC transporter periplasmic substrate-binding protein low > 73

Not shown: 0 genomes with orthologs for CSW01_19005 only; 49 genomes with orthologs for CSW01_07140 only