Conservation of cofitness between CSW01_10000 and CSW01_05690 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10000 23S rRNA (guanine(745)-N(1))-methyltransferase 1.0 CSW01_05690 DUF1365 domain-containing protein 0.42 20
Enterobacter sp. TBS_079 0.56 MPMX20_02727 23S rRNA (guanine(745)-N(1))-methyltransferase 0.39 MPMX20_02176 hypothetical protein low > 85
Rahnella sp. WP5 0.55 EX31_RS24675 23S rRNA (guanine(745)-N(1))-methyltransferase 0.41 EX31_RS23980 DUF1365 domain-containing protein low > 89
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0737 Methyltransferase domain 0.39 EX28DRAFT_1372 Uncharacterized conserved protein low > 76
Erwinia tracheiphila SCR3 0.55 LU632_RS13200 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.40 LU632_RS09365 DUF1365 domain-containing protein low > 73
Erwinia amylovora T8 0.54 OLJFJH_13045 23S rRNA (guanine(745)-N(1))-methyltransferase 0.42 OLJFJH_16595 DUF1365 domain-containing protein low > 58
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_22385 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.40 IJEDHG_19830 DUF1365 domain-containing protein low > 61
Pectobacterium carotovorum WPP14 0.53 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase 0.40 HER17_RS10555 DUF1365 domain-containing protein low > 75
Klebsiella michiganensis M5al 0.53 BWI76_RS17920 23S rRNA (guanine(745)-N(1))-methyltransferase 0.37 BWI76_RS12570 DUF1365 domain-containing protein low > 92
Klebsiella pneumoniae MKP103 0.53 KDGMDA_25200 23S rRNA (guanine(745)-N(1))-methyltransferase 0.34 KDGMDA_11805 Plasmid partition par a protein low > 95
Shewanella oneidensis MR-1 0.43 SO2788 rrmA ribosomal RNA large subunit methyltransferase A (NCBI ptt file) 0.28 SO3380 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_2570 rrmA 23S rRNA methyltransferase A (RefSeq) 0.28 Shewana3_1170 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.43 Shew_1613 rrmA 23S rRNA methyltransferase A (RefSeq) 0.40 Shew_1483 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_1971 rrmA 23S rRNA methyltransferase A (RefSeq) 0.28 Sama_0815 hypothetical protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.36 OH686_06565 23S rRNA (guanine(745)-N(1))-methyltransferase 0.23 OH686_07870 hypothetical protein low > 80
Pseudomonas stutzeri RCH2 0.36 Psest_1617 Methylase involved in ubiquinone/menaquinone biosynthesis 0.25 Psest_2401 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_06095 SAM-dependent methyltransferase 0.21 AO356_25320 hypothetical protein low > 104
Pseudomonas sp. DMC3 0.34 GFF2041 23S rRNA (guanine(745)-N(1))-methyltransferase 0.23 GFF4483 hypothetical protein low > 89
Alteromonas macleodii MIT1002 0.34 MIT1002_01980 23S rRNA (guanine(745)-N(1))-methyltransferase 0.34 MIT1002_02687 hypothetical protein low > 70
Pseudomonas putida KT2440 0.33 PP_1524 23S rRNA m1G745 methyltransferase 0.23 PP_2735 conserved protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.23 Psyr_0957 Protein of unknown function DUF1365 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.23 Psyr_0957 Protein of unknown function DUF1365 low > 86
Pseudomonas lactucae CFBP13502 0.33 GEMAOFIL_01400 23S rRNA (guanine(745)-N(1))-methyltransferase 0.24 GEMAOFIL_00935 hypothetical protein low > 96
Pseudomonas fluorescens SBW25 0.33 PFLU_RS06215 methyltransferase domain-containing protein 0.24 PFLU_RS03695 DUF1365 domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS06215 methyltransferase domain-containing protein 0.24 PFLU_RS03695 DUF1365 domain-containing protein low > 109
Acinetobacter baumannii LAC-4 0.33 RR41_RS01545 methyltransferase domain-containing protein 0.20 RR41_RS06585 DUF1365 domain-containing protein low > 55
Pseudomonas simiae WCS417 0.32 PS417_06150 SAM-dependent methlyltransferase 0.24 PS417_03645 hypothetical protein low > 88
Pseudomonas segetis P6 0.32 ACVTMO_RS17185 putative RNA methyltransferase 0.25 ACVTMO_RS06660 DUF1365 domain-containing protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3084 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.19 Pf6N2E2_1349 FIG001571: Hypothetical protein low > 103
Pseudomonas sp. BP01 0.32 JOY50_RS26130 putative RNA methyltransferase 0.23 JOY50_RS03415 DUF1365 domain-containing protein low > 84
Pseudomonas sp. RS175 0.32 PFR28_00385 23S rRNA (guanine(745)-N(1))-methyltransferase 0.20 PFR28_02037 hypothetical protein low > 88
Pseudomonas orientalis W4I3 0.32 QF045_RS08995 methyltransferase domain-containing protein 0.24 QF045_RS06625 DUF1365 domain-containing protein low > 93
Marinobacter adhaerens HP15 0.28 HP15_1754 rRNA (guanine-N1-)-methyltransferase A, predicted 0.29 HP15_1772 protein containing DUF1365 low > 73

Not shown: 28 genomes with orthologs for CSW01_10000 only; 30 genomes with orthologs for CSW01_05690 only