Conservation of cofitness between CSW01_03430 and CSW01_05325 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03430 U32 family peptidase 1.0 CSW01_05325 acetyl-CoA C-acyltransferase FadI 0.57 2
Rahnella sp. WP5 0.68 EX31_RS08485 U32 family peptidase 0.70 EX31_RS19710 acetyl-CoA C-acyltransferase FadI low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1509 FIG139928: Putative protease 0.69 GFF1955 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 78
Dickeya dadantii 3937 0.67 DDA3937_RS03110 U32 family peptidase 0.66 DDA3937_RS14605 acetyl-CoA C-acyltransferase FadI low > 74
Escherichia fergusonii Becca 0.67 EFB2_00664 hypothetical protein 0.71 EFB2_01517 3-ketoacyl-CoA thiolase FadI low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_00541 hypothetical protein 0.70 OHPLBJKB_01364 3-ketoacyl-CoA thiolase FadI low > 74
Escherichia coli ECOR38 0.67 HEPCGN_17045 rlhA U32 family peptidase 0.71 HEPCGN_21750 fadI acetyl-CoA C-acyltransferase FadI low > 88
Escherichia coli Nissle 1917 0.67 ECOLIN_RS18145 U32 family peptidase 0.71 ECOLIN_RS13555 acetyl-CoA C-acyltransferase FadI low > 55
Dickeya dianthicola 67-19 0.67 HGI48_RS03285 U32 family peptidase 0.66 HGI48_RS14555 acetyl-CoA C-acyltransferase FadI low > 71
Escherichia coli ECRC100 0.67 OKFHMN_18170 rlhA U32 family peptidase 0.71 OKFHMN_22555 fadI acetyl-CoA C-acyltransferase FadI low > 79
Escherichia coli ECRC62 0.67 BNILDI_01560 rlhA U32 family peptidase 0.71 BNILDI_13105 fadI acetyl-CoA C-acyltransferase FadI low > 75
Escherichia coli ECRC102 0.67 NIAGMN_15930 rlhA U32 family peptidase 0.71 NIAGMN_20330 fadI acetyl-CoA C-acyltransferase FadI low > 80
Escherichia coli BL21 0.67 ECD_03026 U32 peptidase family protein 0.71 ECD_02266 beta-ketoacyl-CoA thiolase, anaerobic, subunit low > 61
Escherichia coli BW25113 0.67 b3159 yhbV orf, hypothetical protein (VIMSS) 0.71 b2342 yfcY acetyl-CoA acetyltransferase (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_08690 rlhA U32 family peptidase 0.71 MCAODC_13585 fadI acetyl-CoA C-acyltransferase FadI low > 87
Escherichia coli ECRC99 0.67 KEDOAH_09980 rlhA U32 family peptidase 0.70 KEDOAH_05640 fadI acetyl-CoA C-acyltransferase FadI — —
Escherichia coli ECRC98 0.67 JDDGAC_21795 rlhA U32 family peptidase 0.71 JDDGAC_26515 fadI acetyl-CoA C-acyltransferase FadI low > 87
Serratia liquefaciens MT49 0.66 IAI46_02010 U32 family peptidase 0.75 IAI46_18050 acetyl-CoA C-acyltransferase FadI low > 87
Escherichia coli ECOR27 0.66 NOLOHH_09970 rlhA U32 family peptidase 0.71 NOLOHH_14190 fadI acetyl-CoA C-acyltransferase FadI low > 76
Klebsiella pneumoniae MKP103 0.66 KDGMDA_05845 U32 family peptidase 0.71 KDGMDA_27295 acetyl-CoA C-acyltransferase FadI low > 95
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3208 Collagenase and related proteases 0.72 EX28DRAFT_0270 fatty oxidation complex, beta subunit FadI low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS24975 U32 family peptidase 0.74 BWI76_RS20460 acetyl-CoA C-acyltransferase FadI low > 92
Pectobacterium carotovorum WPP14 0.65 HER17_RS18165 U32 family peptidase 0.71 HER17_RS06885 acetyl-CoA C-acyltransferase FadI low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_04063 hypothetical protein 0.72 MPMX20_03269 3-ketoacyl-CoA thiolase FadI low > 85
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS09065 U32 family peptidase 0.65 PagCFBP13505_RS00080 acetyl-CoA C-acyltransferase FadI low > 74
Pantoea sp. MT58 0.63 IAI47_16970 U32 family peptidase 0.65 IAI47_06125 acetyl-CoA C-acyltransferase FadI low > 76
Pseudomonas sp. SVBP6 0.47 COO64_RS14195 U32 family peptidase 0.33 COO64_RS26320 acetyl-CoA C-acetyltransferase low > 93
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_03432 hypothetical protein 0.33 GEMAOFIL_03336 3-ketoacyl-CoA thiolase FadI low > 96
Pseudomonas sp. RS175 0.46 PFR28_02213 hypothetical protein 0.32 PFR28_05239 3-ketoacyl-CoA thiolase FadI low > 88
Shewanella loihica PV-4 0.46 Shew_2788 peptidase U32 (RefSeq) 0.73 Shew_2426 fadI 3-ketoacyl-CoA thiolase (RefSeq) low > 60
Pseudomonas simiae WCS417 0.46 PS417_15750 protease 0.34 PS417_15175 acetyl-CoA acetyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_25165 protease 0.32 AO356_08090 acetyl-CoA acetyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_722 FIG139928: Putative protease 0.31 Pf6N2E2_3492 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 103
Shewanella oneidensis MR-1 0.44 SO1248 hypothetical peptidase (NCBI ptt file) 0.73 SO3089 fatty oxidation complex, beta subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.44 Shewana3_1064 peptidase U32 (RefSeq) 0.74 Shewana3_1460 fadI 3-ketoacyl-CoA thiolase (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.44 IKLFDK_20170 U32 family peptidase 0.33 IKLFDK_29660 acetyl-CoA C-acetyltransferase low > 98
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_5745 FIG139928: Putative protease 0.33 Pf1N1B4_1270 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS13310 U32 family peptidase 0.33 DY961_RS09690 acetyl-CoA C-acetyltransferase low > 100
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_22055 protease 0.34 AO353_13880 acetyl-CoA acetyltransferase low > 101
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS48615 U32 family peptidase 0.33 DQ20_RS52355 acetyl-CoA C-acetyltransferase low > 101
Shewanella amazonensis SB2B 0.41 Sama_0997 peptidase U32 (RefSeq) 0.72 Sama_2168 fadI 3-ketoacyl-CoA thiolase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2374 Collagenase and related proteases 0.68 B158DRAFT_1007 fatty oxidation complex, beta subunit FadI low > 40
Dechlorosoma suillum PS 0.38 Dsui_0963 collagenase-like protease 0.27 Dsui_0325 acetyl-CoA acetyltransferase low > 51
Ralstonia solanacearum PSI07 0.35 RPSI07_RS06745 U32 family peptidase 0.34 RPSI07_RS21350 acetyl-CoA C-acyltransferase low > 81

Not shown: 13 genomes with orthologs for CSW01_03430 only; 28 genomes with orthologs for CSW01_05325 only