Conservation of cofitness between CSW01_01375 and CSW01_04065 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Vibrio cholerae E7946 ATCC 55056	1.0	CSW01_01375		IclR family transcriptional regulator	1.0	CSW01_04065		D-amino acid dehydrogenase small subunit	0.42	11
Variovorax sp. OAS795	0.64	ABID97_RS03230		uracil-DNA glycosylase family protein	0.56	ABID97_RS18125		D-amino acid dehydrogenase	low	> 91
Variovorax sp. SCN45	0.62	GFF3441		Hypothetical protein VC0266 (sugar utilization related?)	0.54	GFF1773		D-amino acid dehydrogenase (EC 1.4.99.6)	low	> 127
Echinicola vietnamensis KMM 6221, DSM 17526	0.62	Echvi_0990		Uracil-DNA glycosylase	0.16	Echvi_3950		Glycine/D-amino acid oxidases (deaminating)	low	> 79
Paraburkholderia graminis OAS925	0.61	ABIE53_003949		uracil-DNA glycosylase	0.54	ABIE53_003133		D-amino-acid dehydrogenase	low	> 113
Azospirillum sp. SherDot2	0.59	MPMX19_02647		hypothetical protein	0.57	MPMX19_06097		D-amino acid dehydrogenase 1	low	> 112
Cupriavidus basilensis FW507-4G11	0.58	RR42_RS27445		hypothetical protein	0.52	RR42_RS04585		amino acid dehydrogenase	low	> 128
Azospirillum brasilense Sp245	0.57	AZOBR_RS00625		IclR family transcriptional regulator	0.57	AZOBR_RS08020		D-alanine dehydrogenase (EC 1.4.99.-) (from data)	low	> 97
Shewanella loihica PV-4	0.57	Shew_2359		uracil-DNA glycosylase superfamily protein (RefSeq)	0.16	Shew_2360		D-hydroxyproline dehydrogenase (from data)	low	> 60
Burkholderia phytofirmans PsJN	0.56	BPHYT_RS23300		IclR family transcriptional regulator	0.53	BPHYT_RS14790		D-amino acid dehydrogenase	—	—
Rhodospirillum rubrum S1H	0.54	Rru_A3644		Uracil-DNA glycosylase superfamily (NCBI)	0.40	Rru_A1546		FAD dependent oxidoreductase (NCBI)	—	—
Rhodanobacter denitrificans FW104-10B01	0.53	LRK54_RS12170		uracil-DNA glycosylase family protein	0.57	LRK54_RS00590		D-amino acid dehydrogenase	low	> 59
Rhodanobacter sp. FW510-T8	0.53	OKGIIK_11755		Uracil-DNA glycosylase	0.57	OKGIIK_06665	dadA	D-amino acid dehydrogenase small subunit	low	> 53
Rhodanobacter denitrificans MT42	0.53	LRK55_RS11905		uracil-DNA glycosylase family protein	0.57	LRK55_RS00360		D-amino acid dehydrogenase	low	> 63
Rhodanobacter sp000427505 FW510-R12	0.52	LRK53_RS16320		uracil-DNA glycosylase family protein	0.57	LRK53_RS09560		D-amino acid dehydrogenase	low	> 59
Sinorhizobium meliloti 1021	0.52	SMc04210		hypothetical protein	0.16	SM_b20267		D-amino acid dehydrogenase	low	> 103
Brevundimonas sp. GW460-12-10-14-LB2	0.52	A4249_RS09795		uracil-DNA glycosylase family protein	0.54	A4249_RS08770		D-amino acid dehydrogenase	low	> 48
Agrobacterium fabrum C58	0.51	Atu1886		hypothetical protein	0.58	Atu3293		D-amino acid dehydrogenase small subunit	low	> 89
Bosea sp. OAE506	0.48	ABIE41_RS21210		uracil-DNA glycosylase family protein	0.14	ABIE41_RS13645		FAD-binding oxidoreductase	low	> 77
Shewanella amazonensis SB2B	0.48	Sama_1203		hypothetical protein (RefSeq)	0.17	Sama_1533		D-amino-acid dehydrogenase (RefSeq)	low	> 62
Ralstonia solanacearum IBSBF1503	0.48	RALBFv3_RS15885		IclR family transcriptional regulator	0.54	RALBFv3_RS13870		D-amino acid dehydrogenase small subunit	low	> 76
Ralstonia solanacearum PSI07	0.48	RPSI07_RS17480		IclR family transcriptional regulator	0.54	RPSI07_RS19600		D-amino acid dehydrogenase small subunit	low	> 81
Ralstonia solanacearum UW163	0.48	UW163_RS13330		IclR family transcriptional regulator	0.54	UW163_RS15940		D-amino acid dehydrogenase small subunit	—	—
Ralstonia solanacearum GMI1000	0.48	RS_RS06665		IclR family transcriptional regulator	0.54	RS_RS04605		D-amino acid dehydrogenase small subunit	low	> 80
Rhizobium sp. OAE497	0.48	ABIE40_RS10695		uracil-DNA glycosylase family protein	0.14	ABIE40_RS02050		FAD-dependent oxidoreductase	low	> 107
Ralstonia sp. UNC404CL21Col	0.47	ABZR87_RS11455		uracil-DNA glycosylase family protein	0.53	ABZR87_RS09560		D-amino acid dehydrogenase	low	> 80
Phaeobacter inhibens DSM 17395	0.44	PGA1_c24300		Uracil-DNA glycosylase	0.15	PGA1_c05140		D-amino acid dehydrogenase small subunit	low	> 62
Dinoroseobacter shibae DFL-12	0.44	Dshi_0588		uracil-DNA glycosylase superfamily (RefSeq)	0.50	Dshi_0558		D-amino-acid dehydrogenase (RefSeq)	low	> 64
Xanthobacter sp. DMC5	0.44	GFF3396		hypothetical protein	0.56	GFF1413		D-amino acid dehydrogenase 1	—	—

Not shown: 8 genomes with orthologs for CSW01_01375 only; 70 genomes with orthologs for CSW01_04065 only