Conservation of cofitness between CSW01_04635 and CSW01_03750 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04635 methionine ABC transporter substrate-binding protein MetQ 1.0 CSW01_03750 U32 family peptidase 0.55 17
Klebsiella pneumoniae MRSN742743 0.71 GJGHJB_04069 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.76 GJGHJB_01635 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 83
Klebsiella pneumoniae MKP103 0.71 KDGMDA_13605 methionine ABC transporter substrate-binding lipoprotein MetQ 0.76 KDGMDA_26330 tRNA 5-hydroxyuridine modification protein YegQ low > 94
Escherichia coli Nissle 1917 0.71 ECOLIN_RS01085 methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ — —
Escherichia coli BW25113 0.71 b0197 metQ DL-methionine transporter subunit (NCBI) 0.75 b2081 yegQ predicted peptidase (NCBI) low > 76
Escherichia coli ECOR38 0.71 HEPCGN_08000 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 88
Escherichia fergusonii Becca 0.71 EFB2_03846 D-methionine-binding lipoprotein MetQ 0.75 EFB2_01770 23S rRNA 5-hydroxycytidine synthase low > 86
Escherichia coli BL21 0.71 ECD_00196 DL-methionine transporter subunit 0.75 ECD_01986 putative peptidase low > 61
Escherichia coli ECRC62 0.71 BNILDI_09265 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03464 D-methionine-binding lipoprotein MetQ 0.75 OHPLBJKB_01623 putative protease YdcP low > 74
Escherichia coli ECOR27 0.71 NOLOHH_02405 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS16855 MetQ/NlpA family lipoprotein 0.73 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF23 Methionine ABC transporter substrate-binding protein 0.74 GFF3846 Putative protease low > 78
Escherichia coli ECRC100 0.71 OKFHMN_10060 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 79
Serratia liquefaciens MT49 0.71 IAI46_20085 MetQ/NlpA family lipoprotein 0.76 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ low > 87
Escherichia coli ECRC98 0.71 JDDGAC_13655 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Rahnella sp. WP5 0.71 EX31_RS12890 MetQ/NlpA family lipoprotein 0.77 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ low > 89
Pectobacterium carotovorum WPP14 0.71 HER17_RS04370 MetQ/NlpA family lipoprotein 0.75 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECRC102 0.71 NIAGMN_07910 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 80
Escherichia coli ECRC101 0.71 MCAODC_00575 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 87
Klebsiella michiganensis M5al 0.71 BWI76_RS05355 methionine ABC transporter substrate-binding protein MetQ 0.76 BWI76_RS19280 U32 family peptidase low > 92
Enterobacter sp. TBS_079 0.71 MPMX20_00881 D-methionine-binding lipoprotein MetQ 0.74 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase low > 85
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3785 lipoprotein, YaeC family 0.74 EX28DRAFT_0478 Collagenase and related proteases low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13516_RS15710 MetQ/NlpA family lipoprotein 0.73 PagCFBP13516_RS07220 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP low > 80
Dickeya dianthicola ME23 0.70 DZA65_RS18000 MetQ/NlpA family lipoprotein 0.71 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ low > 75
Escherichia coli ECRC99 0.70 KEDOAH_18095 metQ methionine ABC transporter substrate-binding lipoprotein MetQ 0.75 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Dickeya dianthicola 67-19 0.70 HGI48_RS16925 MetQ/NlpA family lipoprotein 0.71 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ low > 71
Erwinia tracheiphila SCR3 0.70 LU632_RS19830 MetQ/NlpA family lipoprotein 0.70 LU632_RS08665 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 73
Pantoea sp. MT58 0.70 IAI47_15395 MetQ/NlpA family lipoprotein 0.73 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ low > 76
Erwinia tracheiphila HP pepo 2.2 0.69 IJEDHG_15315 nlpA ABC-type metal ion transport system periplasmic component/surface antigen 0.70 IJEDHG_18770 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 61
Acidovorax sp. GW101-3H11 0.46 Ac3H11_1311 Methionine ABC transporter substrate-binding protein 0.54 Ac3H11_3295 Probable protease (EC 3.4.24.3) — —
Fusobacterium nucleatum SB010 0.39 HUW76_06260 MetQ/NlpA family ABC transporter substrate-binding protein 0.29 HUW76_02115 U32 family peptidase low > 35
Marinobacter adhaerens HP15 0.36 HP15_3905 lipoprotein, YaeC family 0.55 HP15_2983 peptidase, U32 family low > 73
Pseudomonas sp. S08-1 0.36 OH686_12270 Methionine ABC transporter substrate-binding protein 0.68 OH686_13055 Uncharacterized protease YegQ low > 80
Pseudomonas segetis P6 0.35 ACVTMO_RS01625 MetQ/NlpA family ABC transporter substrate-binding protein 0.69 ACVTMO_RS03685 trhP prephenate-dependent tRNA uridine(34) hydroxylase TrhP low > 75
Pseudomonas sp. BP01 0.35 JOY50_RS20545 MetQ/NlpA family ABC transporter substrate-binding protein 0.65 JOY50_RS12690 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 84
Pseudomonas orientalis W4I3 0.34 QF045_RS03295 MetQ/NlpA family ABC transporter substrate-binding protein 0.69 QF045_RS12375 tRNA 5-hydroxyuridine modification protein YegQ low > 93
Pseudomonas aeruginosa PA14 0.34 IKLFDK_25885 methionine ABC transporter substrate-binding protein 0.68 IKLFDK_26220 tRNA 5-hydroxyuridine modification protein YegQ low > 98
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS01080 ABC transporter substrate-binding protein 0.69 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ low > 109
Pseudomonas fluorescens SBW25 0.34 PFLU_RS01080 ABC transporter substrate-binding protein 0.69 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ low > 109
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_00428 putative D-methionine-binding lipoprotein MetQ 0.67 GEMAOFIL_02169 23S rRNA 5-hydroxycytidine synthase low > 96
Pseudomonas protegens RBAN4 0.34 FABNJH_00365 nlpA NlpA 0.66 FABNJH_20725 yegQ tRNA 5-hydroxyuridine modification protein YegQ — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_11520 methionine ABC transporter substrate-binding protein 0.67 AO356_21300 protease low > 104
Pseudomonas stutzeri RCH2 0.34 Psest_4316 ABC-type metal ion transport system, periplasmic component/surface antigen 0.73 Psest_4096 Collagenase and related proteases low > 67
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4174 Methionine ABC transporter substrate-binding protein 0.68 Pf6N2E2_45 Putative protease low > 103
Pseudomonas sp. SVBP6 0.33 COO64_RS12570 MetQ/NlpA family ABC transporter substrate-binding protein 0.67 COO64_RS24350 yegQ tRNA 5-hydroxyuridine modification protein YegQ low > 91
Pseudomonas sp. DMC3 0.33 GFF642 D-methionine-binding lipoprotein MetQ 0.68 GFF1422 23S rRNA 5-hydroxycytidine synthase low > 89
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_604 Methionine ABC transporter substrate-binding protein 0.68 PfGW456L13_2485 Putative protease low > 87
Pseudomonas sp. RS175 0.32 PFR28_04818 Methionine-binding lipoprotein MetQ 0.68 PFR28_02843 hypothetical protein low > 88
Dechlorosoma suillum PS 0.30 Dsui_2064 ABC-type metal ion transport system, periplasmic component/surface antigen 0.53 Dsui_0433 collagenase-like protease low > 51

Not shown: 34 genomes with orthologs for CSW01_04635 only; 15 genomes with orthologs for CSW01_03750 only