Conservation of cofitness between CSW01_02860 and CSW01_03435 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02860 sulfate ABC transporter permease subunit CysW 1.0 CSW01_03435 protease 0.62 20
Shewanella sp. ANA-3 0.72 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) 0.62 Shewana3_1065 peptidase U32 (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO3601 cysW-1 sulfate ABC transporter, permease protein (NCBI ptt file) 0.62 SO1249 peptidase, U32 family (NCBI ptt file) low > 76
Escherichia coli ECRC62 0.62 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU low > 75
Escherichia coli Nissle 1917 0.62 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW 0.74 ECOLIN_RS18140 peptidase U32 family protein low > 55
Escherichia fergusonii Becca 0.62 EFB2_01454 Sulfate transport system permease protein CysW 0.74 EFB2_00665 putative protease YhbU 0.68 29
Rahnella sp. WP5 0.62 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW 0.74 EX31_RS08480 U32 family peptidase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01300 Sulfate transport system permease protein CysW 0.74 OHPLBJKB_00542 putative protease YhbU low > 74
Escherichia coli BW25113 0.62 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) low > 76
Escherichia coli ECOR38 0.62 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 HEPCGN_17050 protease low > 88
Escherichia coli ECOR27 0.61 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU low > 76
Enterobacter asburiae PDN3 0.61 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW 0.72 EX28DRAFT_3207 Collagenase and related proteases low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit 0.75 BWI76_RS24970 peptidase U32 low > 92
Escherichia coli BL21 0.61 ECD_02323 sulfate/thiosulfate ABC transporter permease 0.74 ECD_03025 U32 peptidase family protein low > 61
Escherichia coli ECRC100 0.61 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 OKFHMN_18175 protease low > 79
Escherichia coli ECRC102 0.61 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU low > 80
Escherichia coli ECRC98 0.61 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 JDDGAC_21800 protease low > 87
Escherichia coli ECRC99 0.61 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 KEDOAH_09975 protease — —
Enterobacter sp. TBS_079 0.61 MPMX20_03315 Sulfate transport system permease protein CysW 0.72 MPMX20_04062 putative protease YhbU low > 85
Escherichia coli ECRC101 0.61 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW 0.74 MCAODC_08695 protease low > 87
Pectobacterium carotovorum WPP14 0.61 HER17_RS17215 sulfate/thiosulfate ABC transporter permease CysW 0.74 HER17_RS18160 U32 family peptidase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2057 Sulfate transport system permease protein CysW 0.74 GFF1510 FIG139552: Putative protease low > 78
Klebsiella pneumoniae MKP103 0.60 KDGMDA_27535 sulfate/thiosulfate ABC transporter permease CysW 0.75 KDGMDA_05840 protease low > 95
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS19940 sulfate/thiosulfate ABC transporter permease CysW 0.71 PagCFBP13505_RS09060 U32 family peptidase low > 74
Serratia liquefaciens MT49 0.59 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW 0.71 IAI46_02015 U32 family peptidase low > 87
Erwinia tracheiphila SCR3 0.58 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW 0.72 LU632_RS21005 U32 family peptidase low > 73
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_16810 cysW sulfate/thiosulfate ABC transporter permease CysW 0.72 IJEDHG_14005 protease low > 61
Pantoea sp. MT58 0.58 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW 0.72 IAI47_16965 U32 family peptidase low > 76
Agrobacterium fabrum C58 0.58 Atu3502 ABC transporter permease 0.41 Atu4397 protease low > 89
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS12255 sulfate/thiosulfate transporter permease subunit 0.49 RR42_RS08775 protease low > 128
Azospirillum brasilense Sp245 0.55 AZOBR_RS19275 sulfate/thiosulfate transporter permease subunit 0.45 AZOBR_RS28235 protease low > 97
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW 0.53 RALBFv3_RS16695 protease low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS13420 sulfate ABC transporter permease subunit CysW 0.53 UW163_RS18050 protease — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW 0.53 RPSI07_RS06750 U32 family peptidase low > 81
Azospirillum sp. SherDot2 0.53 MPMX19_04168 Sulfate transport system permease protein CysW 0.45 MPMX19_03049 putative protease YhbU low > 112
Dechlorosoma suillum PS 0.53 Dsui_0259 sulfate ABC transporter, permease protein CysW 0.60 Dsui_0962 collagenase-like protease 0.82 41
Ralstonia solanacearum GMI1000 0.52 RS_RS06750 sulfate ABC transporter permease subunit CysW 0.49 RS_RS21795 U32 family peptidase low > 80
Acidovorax sp. GW101-3H11 0.52 Ac3H11_910 Sulfate transport system permease protein CysW 0.57 Ac3H11_4294 FIG139552: Putative protease low > 79
Pseudomonas aeruginosa PUPa3 0.51 DQ20_RS37940 cysW;go_component=plasma sulfate ABC transporter permease subunit CysW 0.65 DQ20_RS48610 peptidase U32 family protein low > 101
Pseudomonas aeruginosa MRSN321 0.51 DY961_RS21350 cysW;go_component=plasma sulfate ABC transporter permease subunit CysW 0.65 DY961_RS13305 peptidase U32 family protein low > 100
Pseudomonas aeruginosa PA14 0.51 IKLFDK_24055 sulfate ABC transporter permease subunit CysW 0.65 IKLFDK_20175 protease low > 98
Pseudomonas sp. SVBP6 0.51 COO64_RS12520 cysW sulfate ABC transporter permease subunit CysW 0.64 COO64_RS14190 peptidase U32 family protein low > 93
Castellaniella sp019104865 MT123 0.50 ABCV34_RS03945 sulfate ABC transporter permease subunit CysW 0.63 ABCV34_RS06420 peptidase U32 family protein low > 48
Pseudomonas stutzeri RCH2 0.50 Psest_4062 sulfate ABC transporter, permease protein CysW 0.65 Psest_0835 Collagenase and related proteases 0.20 26
Pseudomonas simiae WCS417 0.49 PS417_00940 sulfate ABC transporter permease 0.62 PS417_15755 protease low > 88
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_00411 Sulfate transport system permease protein CysW 0.63 GEMAOFIL_03433 putative protease YhbU low > 96
Pseudomonas sp. RS175 0.49 PFR28_04764 Sulfate transport system permease protein CysW 0.63 PFR28_02214 putative protease YhbU low > 88
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_10675 sulfate ABC transporter permease 0.63 AO356_25160 protease low > 104
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4003 Sulfate transport system permease protein CysW 0.63 Pf6N2E2_721 FIG139552: Putative protease low > 103
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1725 Sulfate transport system permease protein CysW 0.63 Pf1N1B4_5746 FIG139552: Putative protease 0.53 31
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_11550 sulfate ABC transporter permease 0.64 AO353_22050 protease low > 101
Magnetospirillum magneticum AMB-1 0.47 AMB_RS10135 sulfate ABC transporter permease subunit CysW 0.46 AMB_RS02530 U32 family peptidase low > 64
Dickeya dianthicola 67-19 0.46 HGI48_RS15980 sulfate ABC transporter permease subunit CysW 0.73 HGI48_RS03290 U32 family peptidase low > 71
Rhodopseudomonas palustris CGA009 0.46 TX73_003865 sulfate ABC transporter permease subunit CysW 0.46 TX73_004810 U32 family peptidase — —
Dickeya dadantii 3937 0.46 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW 0.73 DDA3937_RS03115 U32 family peptidase low > 74
Dickeya dianthicola ME23 0.45 DZA65_RS17065 sulfate ABC transporter permease subunit CysW 0.73 DZA65_RS03285 U32 family peptidase low > 75

Not shown: 35 genomes with orthologs for CSW01_02860 only; 5 genomes with orthologs for CSW01_03435 only