Conservation of cofitness between CSW01_17220 and CSW01_03070 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17220 phosphonate utilization transcriptional regulator PhnR 1.0 CSW01_03070 hemolysin 0.56 7
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_02400 MFS transporter 0.25 AO353_15270 phospholipid-binding protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_19385 MFS transporter 0.23 AO356_17090 phospholipid-binding protein low > 104
Pseudomonas sp. DMC3 0.47 GFF2592 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons 0.24 GFF4432 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3749 2-aminoethylphosphonate uptake and metabolism regulator 0.23 Pf1N1B4_957 21 kDa hemolysin precursor — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5791 2-aminoethylphosphonate uptake and metabolism regulator 0.23 Pf6N2E2_5342 21 kDa hemolysin precursor low > 103
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4198 2-aminoethylphosphonate uptake and metabolism regulator 0.24 PfGW456L13_1639 21 kDa hemolysin precursor low > 87
Pseudomonas sp. SVBP6 0.46 COO64_RS06940 phnR phosphonate utilization transcriptional regulator PhnR 0.26 COO64_RS11825 BON domain-containing protein low > 93
Pseudomonas sp. RS175 0.46 PFR28_03159 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons 0.23 PFR28_03601 hypothetical protein low > 88
Pseudomonas putida KT2440 0.45 PP_1727 Transcriptional regulator, GntR family 0.26 PP_1322 putative Lipoprotein low > 96
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1607 transcriptional regulator, GntR family 0.23 Psyr_4116 Transport-associated protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1607 transcriptional regulator, GntR family 0.23 Psyr_4116 Transport-associated protein low > 86
Pseudomonas fluorescens SBW25 0.45 PFLU_RS10020 UTRA domain-containing protein 0.22 PFLU_RS04635 BON domain-containing protein low > 109
Pseudomonas sp. BP01 0.45 JOY50_RS27920 UTRA domain-containing protein 0.25 JOY50_RS15185 BON domain-containing protein low > 84
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS10020 UTRA domain-containing protein 0.22 PFLU_RS04635 BON domain-containing protein low > 109
Pseudomonas aeruginosa PA14 0.44 IKLFDK_16615 MFS transporter 0.27 IKLFDK_01960 phospholipid-binding protein low > 98
Pseudomonas simiae WCS417 0.44 PS417_09365 MFS transporter 0.22 PS417_04570 phospholipid-binding protein — —
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS00670 UTRA domain-containing protein 0.27 DY961_RS24345 BON domain-containing protein low > 100
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS40365 UTRA domain-containing protein 0.27 DQ20_RS56805 BON domain-containing protein low > 101
Pantoea sp. MT58 0.43 IAI47_17920 UTRA domain-containing protein 0.28 IAI47_02830 divisome-associated lipoprotein YraP low > 76
Klebsiella pneumoniae MKP103 0.43 KDGMDA_08455 phosphonate utilization transcriptional regulator PhnR 0.26 KDGMDA_05800 division/outer membrane stress-associated lipid-binding lipoprotein low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4332 2-aminoethylphosphonate uptake and metabolism regulator 0.29 GFF1517 21 kDa hemolysin precursor low > 78
Rahnella sp. WP5 0.42 EX31_RS11765 UTRA domain-containing protein 0.28 EX31_RS12530 divisome-associated lipoprotein YraP low > 89
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS22230 UTRA domain-containing protein 0.29 PagCFBP13505_RS11430 divisome-associated lipoprotein YraP low > 74
Serratia liquefaciens MT49 0.42 IAI46_10825 phosphonate utilization transcriptional regulator PhnR 0.29 IAI46_22315 divisome-associated lipoprotein YraP low > 87
Dickeya dadantii 3937 0.37 DDA3937_RS17460 UTRA domain-containing protein 0.27 DDA3937_RS01695 divisome-associated lipoprotein YraP low > 74
Dickeya dianthicola ME23 0.37 DZA65_RS18590 UTRA domain-containing protein 0.27 DZA65_RS01665 divisome-associated lipoprotein YraP — —
Dickeya dianthicola 67-19 0.37 HGI48_RS17525 UTRA domain-containing protein 0.27 HGI48_RS01590 divisome-associated lipoprotein YraP low > 71
Escherichia coli ECRC62 0.26 BNILDI_05320 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 BNILDI_01515 diaA DnaA initiator-associating protein DiaA low > 75
Escherichia coli ECRC99 0.26 KEDOAH_14070 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 KEDOAH_09935 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECOR38 0.26 HEPCGN_12710 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 HEPCGN_17090 dolP division/outer membrane stress-associated lipid-binding lipoprotein low > 88
Escherichia coli ECOR27 0.26 NOLOHH_06210 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.28 NOLOHH_10015 dolP division/outer membrane stress-associated lipid-binding lipoprotein low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS22320 GntR family transcriptional regulator 0.29 ECOLIN_RS18105 division/outer membrane stress-associated lipid-binding lipoprotein low > 55
Escherichia coli ECRC100 0.26 OKFHMN_14080 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 OKFHMN_18215 diaA DnaA initiator-associating protein DiaA low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_04180 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons 0.29 OHPLBJKB_00550 Osmotically-inducible protein Y low > 74
Escherichia coli ECRC101 0.26 MCAODC_04580 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 MCAODC_08735 diaA DnaA initiator-associating protein DiaA low > 87
Escherichia fergusonii Becca 0.26 EFB2_04744 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons 0.29 EFB2_00673 Osmotically-inducible protein Y low > 86
Escherichia coli BW25113 0.26 b3872 yihL predicted DNA-binding transcriptional regulator (NCBI) 0.29 b3150 yraP hypothetical protein (NCBI) low > 76
Escherichia coli ECRC98 0.26 JDDGAC_17705 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 JDDGAC_21840 diaA DnaA initiator-associating protein DiaA low > 87
Escherichia coli BL21 0.26 ECD_03757 putative DNA-binding transcriptional regulator 0.29 ECD_03017 outer membrane lipoprotein low > 61
Escherichia coli ECRC102 0.26 NIAGMN_11835 yihL Uncharacterized HTH-type transcriptional regulator YihL 0.29 NIAGMN_15975 diaA DnaA initiator-associating protein DiaA low > 80
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS22990 transcriptional regulator 0.18 HSERO_RS23365 transporter low > 78
Azospirillum sp. SherDot2 0.17 MPMX19_03609 HTH-type transcriptional repressor NagR 0.18 MPMX19_04430 hypothetical protein low > 112
Enterobacter asburiae PDN3 0.16 EX28DRAFT_2262 Transcriptional regulators 0.27 EX28DRAFT_3199 Predicted periplasmic or secreted lipoprotein low > 76
Enterobacter sp. TBS_079 0.15 MPMX20_01358 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.28 MPMX20_04054 Osmotically-inducible protein Y low > 85
Klebsiella michiganensis M5al 0.15 BWI76_RS27890 GntR family transcriptional regulator 0.26 BWI76_RS24930 osmotically-inducible protein OsmY low > 92
Pectobacterium carotovorum WPP14 0.15 HER17_RS16070 GntR family transcriptional regulator 0.26 HER17_RS19880 divisome-associated lipoprotein YraP low > 75
Azospirillum brasilense Sp245 0.14 AZOBR_RS15620 GntR family transcriptional regulator 0.14 AZOBR_RS21650 hypothetical protein low > 97
Alteromonas macleodii MIT1002 0.12 MIT1002_03830 HTH-type transcriptional repressor YvoA 0.24 MIT1002_03118 Osmotically-inducible protein Y precursor low > 70

Not shown: 27 genomes with orthologs for CSW01_17220 only; 13 genomes with orthologs for CSW01_03070 only