Conservation of cofitness between CSW01_09245 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09245 Holliday junction branch migration protein RuvA 1.0 CSW01_02830 murein hydrolase activator NlpD 0.83 6
Rahnella sp. WP5 0.66 EX31_RS11675 Holliday junction branch migration protein RuvA 0.41 EX31_RS07830 murein hydrolase activator NlpD 0.44 49
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1640 Holliday junction DNA helicase RuvA 0.39 GFF4789 Lipoprotein NlpD — —
Shewanella loihica PV-4 0.64 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) 0.35 Shew_1212 peptidase M23B (RefSeq) — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA 0.37 MIT1002_00626 Murein hydrolase activator NlpD precursor — —
Shewanella oneidensis MR-1 0.63 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.34 SO3433 nlpD lipoprotein NlpD (NCBI ptt file) 0.42 11
Shewanella sp. ANA-3 0.62 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Shewanella amazonensis SB2B 0.60 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) — —
Serratia liquefaciens MT49 0.60 IAI46_14625 Holliday junction branch migration protein RuvA 0.38 IAI46_03785 murein hydrolase activator NlpD — —
Pseudomonas putida KT2440 0.57 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas sp. S08-1 0.55 OH686_19130 Holliday junction DNA helicase RuvA 0.29 OH686_18180 Murein hydrolase activator NlpD — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03585 ATP-dependent DNA helicase RuvA 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS04910 Holliday junction branch migration protein RuvA 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS04690 Holliday junction branch migration protein RuvA 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10840 Holliday junction branch migration protein RuvA 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA 0.21 OKGIIK_08100 Peptidase M23 — —
Dechlorosoma suillum PS 0.43 Dsui_0485 Holliday junction DNA helicase, RuvA subunit 0.30 Dsui_1970 metalloendopeptidase-like membrane protein — —
Variovorax sp. SCN45 0.41 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) 0.27 GFF2843 Murein hydrolase activator NlpD 0.72 61
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07980 Holliday junction branch migration protein RuvA 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —
Variovorax sp. OAS795 0.39 ABID97_RS24920 Holliday junction branch migration protein RuvA 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1666 Holliday junction DNA helicase RuvA 0.24 GFF3881 Lipoprotein NlpD low > 90
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS02090 Holliday junction DNA helicase RuvA 0.27 HSERO_RS14835 peptidase M23 0.40 27
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS02705 Holliday junction DNA helicase RuvA 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4683 Holliday junction DNA helicase RuvA 0.23 Ac3H11_1786 Lipoprotein NlpD — —

Not shown: 74 genomes with orthologs for CSW01_09245 only; 0 genomes with orthologs for CSW01_02830 only