Conservation of cofitness between CSW01_00850 and CSW01_02830 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00850 multidrug resistance protein 1.0 CSW01_02830 murein hydrolase activator NlpD 0.60 18
Shewanella sp. ANA-3 0.72 Shewana3_0371 acriflavin resistance protein (RefSeq) 0.36 Shewana3_1123 peptidase M23B (RefSeq) low > 73
Shewanella amazonensis SB2B 0.71 Sama_3269 putative multidrug resistance protein (RefSeq) 0.33 Sama_1043 lipoprotein NlpD (RefSeq) low > 62
Pseudomonas fluorescens SBW25 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit 0.29 PFLU_RS06425 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas sp. S08-1 0.47 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.29 OH686_18180 Murein hydrolase activator NlpD low > 80
Pseudomonas sp. BP01 0.47 JOY50_RS14955 multidrug efflux RND transporter permease subunit 0.28 JOY50_RS23750 peptidoglycan DD-metalloendopeptidase family protein — —
Pseudomonas putida KT2440 0.46 PP_0906 putative Multidrug efflux RND transporter 0.28 PP_1622 metallopeptidase, M23B subfamily — —
Pseudomonas sp. SVBP6 0.46 COO64_RS12055 multidrug efflux RND transporter permease subunit 0.30 COO64_RS19790 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_04000 acriflavine resistance protein B 0.29 AO353_16610 peptigoglycan-binding protein LysM — —
Pseudomonas aeruginosa PA14 0.46 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW 0.30 IKLFDK_18500 Lipo NlpD/LppB-like protein low > 98
Pseudomonas aeruginosa PUPa3 0.46 DQ20_RS57065 mexW;inference=COORDINATES multidrug efflux RND transporter permease subunit MexW 0.30 DQ20_RS42265 peptidoglycan DD-metalloendopeptidase family protein low > 101
Pseudomonas aeruginosa MRSN321 0.46 DY961_RS24615 mexW;inference=COORDINATES multidrug efflux RND transporter permease subunit MexW 0.30 DY961_RS14860 peptidoglycan DD-metalloendopeptidase family protein low > 100
Pseudomonas sp. DMC3 0.46 GFF5069 Multidrug efflux pump subunit AcrB 0.29 GFF2083 Murein hydrolase activator NlpD — —
Variovorax sp. SCN45 0.45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system 0.27 GFF2843 Murein hydrolase activator NlpD low > 127
Dechlorosoma suillum PS 0.35 Dsui_1555 cation/multidrug efflux pump 0.30 Dsui_1970 metalloendopeptidase-like membrane protein low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein 0.24 GFF3881 Lipoprotein NlpD low > 90
Acidovorax sp. GW101-3H11 0.34 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein 0.23 Ac3H11_1786 Lipoprotein NlpD — —
Acinetobacter baumannii LAC-4 0.25 RR41_RS03865 multidrug efflux RND transporter permease subunit AdeJ 0.20 RR41_RS05350 peptidoglycan DD-metalloendopeptidase family protein — —
Methylophilus sp. DMC18 0.24 GFF1649 Efflux pump membrane transporter BepE 0.20 GFF448 Murein hydrolase activator NlpD low > 43
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB 0.39 GFF4789 Lipoprotein NlpD low > 78
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_11990 acrB acriflavine resistance protein B 0.21 OKGIIK_08100 Peptidase M23 low > 53
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS11745 efflux RND transporter permease subunit 0.21 ABZR86_RS06580 peptidoglycan DD-metalloendopeptidase family protein low > 74
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_03223 multidrug efflux RND transporter permease subunit OqxB9 0.29 GEMAOFIL_01442 hypothetical protein — —
Serratia liquefaciens MT49 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD 0.38 IAI46_03785 murein hydrolase activator NlpD low > 87
Rahnella sp. WP5 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.41 EX31_RS07830 murein hydrolase activator NlpD 0.38 67
Rhodanobacter denitrificans MT42 0.23 LRK55_RS11630 efflux RND transporter permease subunit 0.21 LRK55_RS16390 peptidoglycan DD-metalloendopeptidase family protein — —
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS23055 multidrug transporter 0.27 HSERO_RS14835 peptidase M23 0.23 45
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS11905 efflux RND transporter permease subunit 0.21 LRK54_RS16665 peptidoglycan DD-metalloendopeptidase family protein low > 59
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.29 B158DRAFT_2299 Membrane proteins related to metalloendopeptidases low > 40
Variovorax sp. OAS795 0.22 ABID97_RS17350 efflux RND transporter permease subunit 0.27 ABID97_RS10725 peptidoglycan DD-metalloendopeptidase family protein low > 91
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS32420 multidrug efflux RND transporter permease subunit 0.22 RR42_RS13190 outer membrane metallopeptidase lipoprotein nlpD low > 128
Rhodanobacter sp000427505 FW510-R12 0.22 LRK53_RS07935 multidrug efflux RND transporter permease subunit 0.20 LRK53_RS12255 peptidoglycan DD-metalloendopeptidase family protein — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS14620 multidrug efflux RND transporter permease subunit 0.22 ABCV34_RS03040 peptidoglycan DD-metalloendopeptidase family protein — —

Not shown: 61 genomes with orthologs for CSW01_00850 only; 3 genomes with orthologs for CSW01_02830 only