Conservation of cofitness between CSW01_03435 and CSW01_01280 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03435 protease 1.0 CSW01_01280 GDP-mannose 4,6-dehydratase 0.75 16
Escherichia coli BL21 0.74 ECD_03025 U32 peptidase family protein 0.83 ECD_01959 GDP-D-mannose dehydratase, NAD(P)-binding low > 61
Escherichia coli ECRC102 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU 0.83 NIAGMN_22385 GDP-mannose 4,6-dehydratase low > 80
Escherichia coli ECRC100 0.74 OKFHMN_18175 protease 0.83 OKFHMN_24440 GDP-mannose 4,6-dehydratase — —
Escherichia coli ECRC99 0.74 KEDOAH_09975 protease 0.83 KEDOAH_03710 GDP-mannose 4,6-dehydratase — —
Escherichia coli ECRC101 0.74 MCAODC_08695 protease 0.83 MCAODC_20500 GDP-mannose 4,6-dehydratase — —
Escherichia coli ECOR27 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU 0.83 NOLOHH_15675 GDP-mannose 4,6-dehydratase low > 75
Escherichia coli ECOR38 0.74 HEPCGN_17050 protease 0.83 HEPCGN_03045 GDP-mannose 4,6-dehydratase low > 88
Escherichia coli ECRC62 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU 0.83 BNILDI_14585 GDP-mannose 4,6-dehydratase low > 75
Escherichia coli BW25113 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) 0.83 b2053 gmd GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC98 0.74 JDDGAC_21800 protease 0.83 JDDGAC_28550 GDP-mannose 4,6-dehydratase — —
Rahnella sp. WP5 0.74 EX31_RS08480 U32 family peptidase 0.52 EX31_RS02865 GDP-mannose 4,6-dehydratase low > 89
Escherichia coli Nissle 1917 0.74 ECOLIN_RS18140 peptidase U32 family protein 0.82 ECOLIN_RS12095 GDP-mannose 4,6-dehydratase low > 55
Pectobacterium carotovorum WPP14 0.74 HER17_RS18160 U32 family peptidase 0.78 HER17_RS14540 GDP-mannose 4,6-dehydratase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1510 FIG139552: Putative protease 0.83 GFF3875 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 78
Escherichia fergusonii Becca 0.74 EFB2_00665 putative protease YhbU 0.83 EFB2_01801 GDP-mannose 4,6-dehydratase low > 86
Dickeya dianthicola ME23 0.73 DZA65_RS03285 U32 family peptidase 0.87 DZA65_RS19730 GDP-mannose 4,6-dehydratase low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS03115 U32 family peptidase 0.87 DDA3937_RS18665 GDP-mannose 4,6-dehydratase low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS03290 U32 family peptidase 0.87 HGI48_RS18595 GDP-mannose 4,6-dehydratase low > 71
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3207 Collagenase and related proteases 0.83 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04062 putative protease YhbU 0.82 MPMX20_03035 GDP-mannose 4,6-dehydratase low > 85
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13516_RS17185 ubiU ubiquinone anaerobic biosynthesis protein UbiU 0.46 PagCFBP13516_RS07405 gmd GDP-mannose 4,6-dehydratase low > 80
Pseudomonas aeruginosa PA14 0.65 IKLFDK_20175 protease 0.39 IKLFDK_26150 GDP-mannose 4 6-dehydratase low > 98
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS13305 peptidase U32 family protein 0.39 DY961_RS25555 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 99
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS48610 peptidase U32 family protein 0.39 DQ20_RS58005 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 101
Pseudomonas stutzeri RCH2 0.65 Psest_0835 Collagenase and related proteases 0.83 Psest_1818 GDP-mannose 4,6-dehydratase low > 67
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_22050 protease 0.42 AO353_10245 GDP-mannose 4,6-dehydratase 0.22 35
Pseudomonas sp. SVBP6 0.64 COO64_RS14190 peptidase U32 family protein 0.45 COO64_RS06615 gmd GDP-mannose 4,6-dehydratase low > 91
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_5746 FIG139552: Putative protease 0.39 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_25160 protease 0.40 AO356_11835 GDP-mannose 4,6-dehydratase low > 104
Pseudomonas sp. RS175 0.63 PFR28_02214 putative protease YhbU 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase low > 88
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_721 FIG139552: Putative protease 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 103
Castellaniella sp019104865 MT123 0.63 ABCV34_RS06420 peptidase U32 family protein 0.71 ABCV34_RS12935 GDP-mannose 4,6-dehydratase — —
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_03433 putative protease YhbU 0.46 GEMAOFIL_04278 GDP-mannose 4,6-dehydratase low > 96
Dechlorosoma suillum PS 0.60 Dsui_0962 collagenase-like protease 0.71 Dsui_0085 GDP-mannose 4,6-dehydratase low > 51
Ralstonia solanacearum PSI07 0.53 RPSI07_RS06750 U32 family peptidase 0.47 RPSI07_RS19840 GDP-mannose 4,6-dehydratase low > 81
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS08775 protease 0.76 RR42_RS33235 GDP-mannose 4,6-dehydratase low > 128
Rhodopseudomonas palustris CGA009 0.46 TX73_004810 U32 family peptidase 0.45 TX73_020470 GDP-mannose 4,6-dehydratase — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS02530 U32 family peptidase 0.63 AMB_RS05505 GDP-mannose 4,6-dehydratase low > 64
Azospirillum brasilense Sp245 0.45 AZOBR_RS28235 protease 0.44 AZOBR_RS33465 GDP-mannose 4 6-dehydratase low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_03049 putative protease YhbU 0.63 MPMX19_06644 GDP-mannose 4,6-dehydratase low > 112
Rhodospirillum rubrum S1H 0.43 Rru_A2525 Peptidase U32 (NCBI) 0.63 Rru_A0253 GDP-mannose 4,6-dehydratase (NCBI) low > 58
Agrobacterium fabrum C58 0.41 Atu4397 protease 0.59 Atu4789 GDP-mannose 4,6-dehydratase low > 89

Not shown: 19 genomes with orthologs for CSW01_03435 only; 41 genomes with orthologs for CSW01_01280 only