Conservation of cofitness between CSW01_00215 and CSW01_01280 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00215 potassium uptake protein TrkH 1.0 CSW01_01280 GDP-mannose 4,6-dehydratase 0.96 9
Pseudomonas sp. DMC3 0.51 GFF2771 Trk system potassium uptake protein TrkI 0.40 GFF545 GDP-mannose 4,6-dehydratase low > 89
Pseudomonas segetis P6 0.50 MPMX49_02921 Trk system potassium uptake protein TrkI 0.43 MPMX49_00388 GDP-mannose 4,6-dehydratase low > 75
Pseudomonas sp. SVBP6 0.50 COO64_RS21795 TrkH family potassium uptake protein 0.45 COO64_RS06615 gmd GDP-mannose 4,6-dehydratase low > 93
Pseudomonas sp. S08-1 0.50 OH686_20750 Trk potassium uptake system protein TrkH 0.40 OH686_11980 GDP-mannose 4,6-dehydratase
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_18480 potassium transporter TrkH 0.42 AO353_10245 GDP-mannose 4,6-dehydratase low > 101
Pseudomonas putida KT2440 0.50 PP_3953 potassium transporter 0.46 PP_1799 GDP-mannose 4,6-dehydratase low > 96
Pseudomonas aeruginosa PA14 0.49 IKLFDK_09050 potassium transporter TrkH 0.39 IKLFDK_26150 GDP-mannose 4 6-dehydratase low > 98
Pseudomonas sp. RS175 0.49 PFR28_00798 Trk system potassium uptake protein TrkI 0.40 PFR28_04554 GDP-mannose 4,6-dehydratase low > 88
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_4413 Potassium uptake protein TrkH 0.40 PfGW456L13_2338 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas aeruginosa MRSN321 0.48 DY961_RS00865 TrkH family potassium uptake protein 0.39 DY961_RS25555 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 100
Pseudomonas lactucae CFBP13502 0.48 GEMAOFIL_04576 Trk system potassium uptake protein TrkI 0.46 GEMAOFIL_04278 GDP-mannose 4,6-dehydratase low > 96
Pseudomonas aeruginosa PUPa3 0.48 DQ20_RS40175 TrkH family potassium uptake protein 0.39 DQ20_RS58005 gmd;go_function=GDP-mannose GDP-mannose 4 6-dehydratase low > 101
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_03995 potassium transporter TrkH 0.40 AO356_11835 GDP-mannose 4,6-dehydratase low > 104
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2634 Potassium uptake protein TrkH 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 103
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3543 Potassium uptake protein TrkH 0.39 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) low > 87
Pseudomonas stutzeri RCH2 0.48 Psest_1879 Trk-type K+ transport systems, membrane components 0.83 Psest_1818 GDP-mannose 4,6-dehydratase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3593 K+ transporter Trk 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3593 K+ transporter Trk 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase low > 86
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23830 TrkH family potassium uptake protein 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23830 TrkH family potassium uptake protein 0.77 PFLU_RS17890 GDP-mannose 4,6-dehydratase low > 109
Dinoroseobacter shibae DFL-12 0.43 Dshi_2406 cation transporter (RefSeq) 0.63 Dshi_4139 GDP-mannose 4,6-dehydratase (RefSeq)
Phaeobacter inhibens DSM 17395 0.40 PGA1_c23520 trk system potassium uptake protein 0.81 PGA1_65p00310 GDP-mannose 4,6-dehydratase Gmd
Magnetospirillum magneticum AMB-1 0.38 AMB_RS20770 TrkH family potassium uptake protein 0.63 AMB_RS05505 GDP-mannose 4,6-dehydratase low > 64
Azospirillum brasilense Sp245 0.38 AZOBR_RS10695 potassium transporter TrkH 0.44 AZOBR_RS33465 GDP-mannose 4 6-dehydratase low > 97
Rhodospirillum rubrum S1H 0.37 Rru_A1134 Cation transporter (NCBI) 0.63 Rru_A0253 GDP-mannose 4,6-dehydratase (NCBI)
Xanthobacter sp. DMC5 0.35 GFF4632 Trk system potassium uptake protein TrkI 0.10 GFF1115 dTDP-glucose 4,6-dehydratase 2
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS13010 TrkH family potassium uptake protein 0.63 HMPREF1078_RS00185 GDP-mannose 4,6-dehydratase low > 61
Bacteroides ovatus ATCC 8483 0.29 BACOVA_04887 potassium uptake protein, TrkH family 0.60 BACOVA_00511 GDP-mannose 4,6-dehydratase low > 96
Agrobacterium fabrum C58 0.29 Atu1204 potassium uptake protein 0.59 Atu4789 GDP-mannose 4,6-dehydratase low > 89
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS13345 TrkH family potassium uptake protein 0.61 HMPREF1058_RS06615 GDP-mannose 4,6-dehydratase low > 67
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS08990 TrkH family potassium uptake protein 0.60 HMPREF1181_RS12530 GDP-mannose 4,6-dehydratase low > 56
Phocaeicola dorei CL03T12C01 0.28 ABI39_RS08550 TrkH family potassium uptake protein 0.61 ABI39_RS20410 GDP-mannose 4,6-dehydratase low > 72
Bacteroides thetaiotaomicron VPI-5482 0.28 BT4097 Trk system K+ uptake protein trkH (NCBI ptt file) 0.60 BT1224 GDP-mannose 4,6-dehydratase (NCBI ptt file)

Not shown: 11 genomes with orthologs for CSW01_00215 only; 56 genomes with orthologs for CSW01_01280 only