Conservation of cofitness between CSW01_03175 and CSW01_01245 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03175 penicillin-binding protein 1B 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.75 11
Serratia liquefaciens MT49 0.49 IAI46_21190 bifunctional glycosyl transferase/transpeptidase 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS05600 bifunctional glycosyl transferase/transpeptidase 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF low > 75
Dickeya dadantii 3937 0.48 DDA3937_RS15915 bifunctional glycosyl transferase/transpeptidase 0.50 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola ME23 0.48 DZA65_RS17115 bifunctional glycosyl transferase/transpeptidase 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.48 HGI48_RS16030 bifunctional glycosyl transferase/transpeptidase 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS13390 bifunctional glycosyl transferase/transpeptidase 0.48 PagCFBP13505_RS18660 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila SCR3 0.46 LU632_RS20060 mrcB bifunctional glycosyl transferase/transpeptidase 0.48 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila HP pepo 2.2 0.46 IJEDHG_15080 Penicillin-binding protein 1B 0.48 IJEDHG_07865 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Pantoea sp. MT58 0.46 IAI47_15615 bifunctional glycosyl transferase/transpeptidase 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Klebsiella pneumoniae MKP103 0.45 KDGMDA_13365 bifunctional glycosyl transferase/transpeptidase 0.45 KDGMDA_07950 ADP-heptose--LPS heptosyltransferase RfaF low > 95
Enterobacter sp. TBS_079 0.45 MPMX20_00835 Penicillin-binding protein 1B 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_3738 penicillin-binding protein 1B 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Escherichia coli BL21 0.45 ECD_00148 fused glycosyl transferase and transpeptidase 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF83 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Erwinia amylovora T8 0.45 OLJFJH_00745 bifunctional glycosyl transferase/transpeptidase 0.49 OLJFJH_05880 ADP-heptose--LPS heptosyltransferase RfaF — —
Klebsiella michiganensis M5al 0.45 BWI76_RS05120 bifunctional glycosyl transferase/transpeptidase 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Escherichia coli BW25113 0.45 b0149 mrcB penicillin-binding protein 1b (NCBI) 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) low > 76
Rahnella sp. WP5 0.45 EX31_RS03230 bifunctional glycosyl transferase/transpeptidase 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF low > 89
Escherichia coli Nissle 1917 0.45 ECOLIN_RS00835 bifunctional glycosyl transferase/transpeptidase 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF low > 55
Escherichia coli ECOR38 0.45 HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03513 Penicillin-binding protein 1B 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECOR27 0.45 NOLOHH_02670 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 76
Escherichia coli ECRC98 0.45 JDDGAC_13920 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli ECRC101 0.45 MCAODC_00840 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli ECRC102 0.45 NIAGMN_08175 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli ECRC100 0.45 OKFHMN_10325 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 79
Escherichia coli ECRC62 0.45 BNILDI_09000 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC99 0.45 KEDOAH_17830 mrcB bifunctional glycosyl transferase/transpeptidase 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia fergusonii Becca 0.45 EFB2_03895 Penicillin-binding protein 1B 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas aeruginosa PA14 0.39 IKLFDK_30125 penicillin-binding protein 1B 0.51 IKLFDK_28475 heptosyltransferase I — —
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_04916 Penicillin-binding protein 1B 0.53 GEMAOFIL_00682 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas sp. DMC3 0.38 GFF4046 Penicillin-binding protein 1B 0.53 GFF3156 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas simiae WCS417 0.38 PS417_23825 penicillin-binding protein 0.53 PS417_02230 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14475 penicillin-binding protein 1B 0.53 AO353_12875 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_2874 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.53 Pf1N1B4_1473 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas sp. RS175 0.38 PFR28_03703 Penicillin-binding protein 1B 0.53 PFR28_05063 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25665 penicillin-binding protein 1B 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25665 penicillin-binding protein 1B 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas sp. SVBP6 0.38 COO64_RS15020 mrcB penicillin-binding protein 1B 0.54 COO64_RS22830 waaF lipopolysaccharide heptosyltransferase II — —
Pseudomonas sp. BP01 0.38 JOY50_RS27745 mrcB penicillin-binding protein 1B 0.54 JOY50_RS17820 waaF lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16150 penicillin-binding protein 1B 0.53 AO356_08950 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas stutzeri RCH2 0.38 Psest_1032 penicillin-binding protein 1B 0.53 Psest_0451 lipopolysaccharide heptosyltransferase II — —
Pseudomonas putida KT2440 0.38 PP_4683 transglycosylase/transpeptidase 0.55 PP_0341 ADP-heptose:LPS heptosyltransferase II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0842 Peptidoglycan glycosyltransferase 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0842 Peptidoglycan glycosyltransferase 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas segetis P6 0.37 MPMX49_01270 Penicillin-binding protein 1B 0.53 MPMX49_04208 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas sp. S08-1 0.37 OH686_08150 penicillin-binding protein 1B 0.53 OH686_09690 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5171 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.54 Pf6N2E2_3671 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1535 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.53 PfGW456L13_212 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —

Not shown: 16 genomes with orthologs for CSW01_03175 only; 25 genomes with orthologs for CSW01_01245 only