Conservation of cofitness between CSW01_09445 and CSW01_01125 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09445 transcription-repair coupling factor 1.0 CSW01_01125 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase 0.54 10
Rahnella sp. WP5 0.65 EX31_RS24520 transcription-repair coupling factor 0.38 EX31_RS10665 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 89
Escherichia coli ECOR38 0.65 HEPCGN_24015 mfd transcription-repair coupling factor 0.37 HEPCGN_04720 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 88
Serratia liquefaciens MT49 0.64 IAI46_10320 transcription-repair coupling factor 0.38 IAI46_14595 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli BW25113 0.64 b1114 mfd transcription-repair coupling factor (NCBI) 0.37 b1855 lpxM lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) low > 76
Escherichia coli ECRC101 0.64 MCAODC_22830 mfd transcription-repair coupling factor 0.37 MCAODC_19090 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli ECRC102 0.64 NIAGMN_24360 mfd transcription-repair coupling factor 0.37 NIAGMN_01745 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 80
Escherichia coli ECRC98 0.64 JDDGAC_07130 mfd transcription-repair coupling factor 0.37 JDDGAC_00890 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 87
Escherichia coli ECRC100 0.64 OKFHMN_03470 mfd transcription-repair coupling factor 0.37 OKFHMN_26315 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 79
Escherichia fergusonii Becca 0.64 EFB2_02861 Transcription-repair-coupling factor 0.37 EFB2_02087 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli ECRC99 0.64 KEDOAH_24285 mfd transcription-repair coupling factor 0.37 KEDOAH_01790 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_02552 Transcription-repair-coupling factor 0.37 OHPLBJKB_01873 Lipid A biosynthesis myristoyltransferase — —
Escherichia coli ECRC62 0.64 BNILDI_19160 mfd transcription-repair coupling factor 0.37 BNILDI_15545 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Escherichia coli BL21 0.64 ECD_01110 transcription-repair coupling factor 0.37 ECD_01826 myristoyl-acyl carrier protein (ACP)-dependent acyltransferase low > 61
Escherichia coli ECOR27 0.64 NOLOHH_20995 mfd transcription-repair coupling factor 0.37 NOLOHH_16755 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS08775 transcription-repair coupling factor 0.36 HER17_RS11795 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Pantoea sp. MT58 0.64 IAI47_11975 transcription-repair coupling factor 0.37 IAI47_08475 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3397 Transcription-repair coupling factor 0.36 GFF1634 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS11205 transcription-repair coupling factor 0.36 BWI76_RS18120 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_1816 transcription-repair coupling factor (mfd) 0.36 EX28DRAFT_0701 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase — —
Enterobacter sp. TBS_079 0.64 MPMX20_01795 Transcription-repair-coupling factor 0.36 MPMX20_02760 Lipid A biosynthesis myristoyltransferase — —
Dickeya dadantii 3937 0.64 DDA3937_RS13000 transcription-repair coupling factor 0.37 DDA3937_RS10110 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Erwinia amylovora T8 0.64 OLJFJH_15445 transcription-repair coupling factor 0.38 OLJFJH_12885 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 58
Dickeya dianthicola 67-19 0.64 HGI48_RS13065 transcription-repair coupling factor 0.36 HGI48_RS10140 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 71
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS19410 transcription-repair coupling factor 0.37 PagCFBP13505_RS02355 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Dickeya dianthicola ME23 0.63 DZA65_RS13530 transcription-repair coupling factor 0.37 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase low > 75
Erwinia tracheiphila SCR3 0.63 LU632_RS14730 mfd transcription-repair coupling factor 0.36 LU632_RS13385 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Klebsiella pneumoniae MKP103 0.63 KDGMDA_18800 transcription-repair coupling factor 0.35 KDGMDA_25385 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase LpxM — —
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_00560 mfd transcription-repair coupling factor 0.36 IJEDHG_22165 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase — —
Shewanella loihica PV-4 0.58 Shew_1630 transcription-repair coupling factor (RefSeq) 0.30 Shew_2213 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) 0.30 SO2088 lipid A biosynthesis acyltransferase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) 0.30 Shewana3_1866 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.55 Sama_1330 transcription-repair coupling factor (RefSeq) 0.33 Sama_1950 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) low > 62
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13240 transcription-repair coupling factor 0.18 ABZR87_RS05575 lipid A biosynthesis lauroyl acyltransferase — —
Ralstonia solanacearum UW163 0.46 UW163_RS14755 transcription-repair coupling factor 0.16 UW163_RS03520 lauroyl acyltransferase — —
Ralstonia solanacearum GMI1000 0.46 RS_RS08275 transcription-repair coupling factor 0.18 RS_RS00670 lauroyl acyltransferase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01445 transcription-repair coupling factor 0.16 RALBFv3_RS10060 lauroyl acyltransferase — —
Ralstonia solanacearum PSI07 0.45 RPSI07_RS16040 transcription-repair coupling factor 0.17 RPSI07_RS23310 lauroyl acyltransferase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4934 Transcription-repair coupling factor 0.19 GFF1354 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) low > 90
Variovorax sp. SCN45 0.45 GFF412 Transcription-repair coupling factor 0.22 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS17285 transcription-repair coupling factor 0.21 ABID97_RS23345 lipid A biosynthesis acyltransferase — —
Acidovorax sp. GW101-3H11 0.45 Ac3H11_328 Transcription-repair coupling factor 0.17 Ac3H11_2970 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) low > 79
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS07845 transcription-repair coupling factor 0.18 RR42_RS03620 lipid A biosynthesis lauroyl acyltransferase low > 128
Dechlorosoma suillum PS 0.44 Dsui_2385 transcription-repair coupling factor Mfd 0.18 Dsui_0647 Lauroyl/myristoyl acyltransferase — —
Agrobacterium fabrum C58 0.32 Atu1778 transcription-repair coupling factor 0.10 Atu1594 lipid A biosynthesis lauroyl acyltransferase — —

Not shown: 64 genomes with orthologs for CSW01_09445 only; 2 genomes with orthologs for CSW01_01125 only