Conservation of cofitness between CSW01_05780 and CSW01_01005 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05780 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase 1.0 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.53 2
Klebsiella pneumoniae MKP103 0.63 KDGMDA_26125 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.64 KDGMDA_07435 Ribosomal RNA large subunit methyltransferase J low > 95
Escherichia coli ECOR38 0.62 HEPCGN_03190 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 HEPCGN_15320 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01674 Histidine biosynthesis bifunctional protein HisIE 0.65 OHPLBJKB_00204 Ribosomal RNA large subunit methyltransferase J low > 74
Escherichia coli BL21 0.62 ECD_01928 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase 0.65 ECD_03348 23S rRNA m(6)A2030 methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC62 0.62 BNILDI_14710 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 BNILDI_03215 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 75
Enterobacter sp. TBS_079 0.62 MPMX20_03008 Histidine biosynthesis bifunctional protein HisIE 0.64 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J low > 85
Escherichia coli BW25113 0.62 b2026 hisI bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) 0.65 b3499 yhiR predicted DNA (exogenous) processing protein (NCBI) low > 76
Enterobacter asburiae PDN3 0.61 EX28DRAFT_0533 phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)/phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) 0.65 EX28DRAFT_4062 Protein involved in catabolism of external DNA low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS18955 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase 0.64 BWI76_RS26680 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 92
Dickeya dadantii 3937 0.59 DDA3937_RS09705 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 DDA3937_RS21255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Dickeya dianthicola ME23 0.59 DZA65_RS10025 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 75
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS01180 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.61 PagCFBP13505_RS17840 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Pantoea sp. MT58 0.59 IAI47_07060 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.61 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3906 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) 0.64 GFF515 Protein involved in catabolism of external DNA low > 78
Dickeya dianthicola 67-19 0.59 HGI48_RS09715 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 HGI48_RS00055 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 71
Alteromonas macleodii MIT1002 0.58 MIT1002_02639 Phosphoribosyl-ATP pyrophosphatase 0.36 MIT1002_02015 Ribosomal RNA large subunit methyltransferase J low > 70
Shewanella oneidensis MR-1 0.57 SO2067 hisI phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (NCBI ptt file) 0.48 SO4659 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli ECRC102 0.57 NIAGMN_22430 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 NIAGMN_14175 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase — —
Escherichia coli ECRC99 0.57 KEDOAH_03665 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 KEDOAH_11735 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase — —
Escherichia coli ECRC100 0.57 OKFHMN_24485 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 OKFHMN_16410 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 79
Escherichia coli ECRC98 0.57 JDDGAC_28595 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 JDDGAC_20040 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 87
Escherichia coli ECRC101 0.57 MCAODC_20455 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 MCAODC_06925 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 87
Escherichia fergusonii Becca 0.57 EFB2_01830 Histidine biosynthesis bifunctional protein HisIE 0.65 EFB2_00316 Ribosomal RNA large subunit methyltransferase J low > 86
Shewanella sp. ANA-3 0.57 Shewana3_1847 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) 0.49 Shewana3_4038 hypothetical protein (RefSeq) low > 73
Escherichia coli Nissle 1917 0.56 ECOLIN_RS11975 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 ECOLIN_RS19990 23S rRNA (adenine(2030)-N(6))-methyltransferase — —
Escherichia coli ECOR27 0.56 NOLOHH_15800 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 NOLOHH_08345 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 76
Shewanella amazonensis SB2B 0.55 Sama_1948 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) 0.51 Sama_3563 hypothetical protein (RefSeq) low > 62
Erwinia amylovora T8 0.55 OLJFJH_12150 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.63 OLJFJH_04555 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 58
Serratia liquefaciens MT49 0.55 IAI46_08180 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.63 IAI46_24235 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.51 42
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_19060 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.62 IJEDHG_12575 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 61
Erwinia tracheiphila SCR3 0.54 LU632_RS08915 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.62 LU632_RS19485 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 73
Pectobacterium carotovorum WPP14 0.53 HER17_RS12260 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.62 HER17_RS21245 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 75
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS01575 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.36 LRK54_RS02005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 59
Shewanella loihica PV-4 0.52 Shew_2204 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) 0.48 Shew_3648 hypothetical protein (RefSeq) low > 60
Rahnella sp. WP5 0.52 EX31_RS11470 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.65 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 89
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS06700 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.37 ABZR86_RS21180 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 74
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_04980 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.36 OKGIIK_04560 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 53
Rhodanobacter sp000427505 FW510-R12 0.51 LRK53_RS08490 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.38 LRK53_RS08040 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS01355 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.36 LRK55_RS01780 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 63
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.2942.1 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) 0.36 Xcc-8004.1778.1 Protein involved in catabolism of external DNA low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS10720 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.22 A4249_RS02525 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 48
Lysobacter sp. OAE881 0.44 ABIE51_RS13295 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.33 ABIE51_RS14285 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 62
Acinetobacter baumannii LAC-4 0.32 RR41_RS17250 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE 0.35 RR41_RS02490 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 55
Acinetobacter radioresistens SK82 0.31 MPMX26_00264 Histidine biosynthesis bifunctional protein HisIE 0.34 MPMX26_02660 Ribosomal RNA large subunit methyltransferase J low > 36

Not shown: 13 genomes with orthologs for CSW01_05780 only; 54 genomes with orthologs for CSW01_01005 only