Conservation of cofitness between CSW01_00395 and CSW01_00765 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00395 ribosomal RNA small subunit methyltransferase J 1.0 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase 0.73 4
Rahnella sp. WP5 0.56 EX31_RS05160 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 EX31_RS14165 Si-specific NAD(P)(+) transhydrogenase low > 89
Serratia liquefaciens MT49 0.56 IAI46_24205 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 IAI46_24470 Si-specific NAD(P)(+) transhydrogenase low > 87
Klebsiella pneumoniae MKP103 0.55 KDGMDA_07420 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.79 KDGMDA_09385 Si-specific NAD(P)(+) transhydrogenase low > 95
Escherichia coli BW25113 0.55 b3497 yhiQ predicted SAM-dependent methyltransferase (NCBI) 0.78 b3962 udhA putative oxidoreductase (VIMSS) low > 76
Escherichia fergusonii Becca 0.55 EFB2_00318 Ribosomal RNA small subunit methyltransferase J 0.78 EFB2_04650 Soluble pyridine nucleotide transhydrogenase low > 86
Escherichia coli Nissle 1917 0.55 ECOLIN_RS19980 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 ECOLIN_RS22875 Si-specific NAD(P)(+) transhydrogenase low > 55
Escherichia coli BL21 0.55 ECD_03346 16S rRNA m(2)G1516 methyltransferase, SAM-dependent 0.78 ECD_03847 pyridine nucleotide transhydrogenase, soluble low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00206 Ribosomal RNA small subunit methyltransferase J 0.78 OHPLBJKB_04088 Soluble pyridine nucleotide transhydrogenase low > 74
Escherichia coli ECRC99 0.55 KEDOAH_11725 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 KEDOAH_14600 sthA Si-specific NAD(P)(+) transhydrogenase — —
Escherichia coli ECOR38 0.55 HEPCGN_15330 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 HEPCGN_12205 sthA Si-specific NAD(P)(+) transhydrogenase low > 88
Escherichia coli ECRC100 0.55 OKFHMN_16420 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 OKFHMN_13560 sthA Si-specific NAD(P)(+) transhydrogenase — —
Escherichia coli ECRC101 0.55 MCAODC_06935 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 MCAODC_04060 sthA Si-specific NAD(P)(+) transhydrogenase low > 87
Escherichia coli ECRC98 0.55 JDDGAC_20050 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 JDDGAC_17185 sthA Si-specific NAD(P)(+) transhydrogenase low > 87
Escherichia coli ECRC102 0.55 NIAGMN_14185 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 NIAGMN_11310 sthA Si-specific NAD(P)(+) transhydrogenase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF518 rRNA small subunit methyltransferase J 0.76 GFF2348 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 78
Escherichia coli ECOR27 0.55 NOLOHH_08355 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 NOLOHH_05695 sthA Si-specific NAD(P)(+) transhydrogenase low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_4064 Putative SAM-dependent methyltransferase 0.79 EX28DRAFT_4425 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 76
Escherichia coli ECRC62 0.55 BNILDI_03205 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 BNILDI_05830 sthA Si-specific NAD(P)(+) transhydrogenase low > 75
Dickeya dadantii 3937 0.54 DDA3937_RS21270 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 DDA3937_RS00975 Si-specific NAD(P)(+) transhydrogenase low > 74
Erwinia amylovora T8 0.54 OLJFJH_04525 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 OLJFJH_06145 Si-specific NAD(P)(+) transhydrogenase low > 58
Pectobacterium carotovorum WPP14 0.54 HER17_RS21305 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.78 HER17_RS00960 Si-specific NAD(P)(+) transhydrogenase low > 75
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_12595 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 IJEDHG_13075 sthA Si-specific NAD(P)(+) transhydrogenase low > 61
Erwinia tracheiphila SCR3 0.53 LU632_RS19465 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 LU632_RS19585 sthA Si-specific NAD(P)(+) transhydrogenase 0.35 45
Enterobacter sp. TBS_079 0.53 MPMX20_04396 Ribosomal RNA small subunit methyltransferase J 0.79 MPMX20_04518 Soluble pyridine nucleotide transhydrogenase low > 85
Pantoea agglomerans CFBP13505 P0401 0.52 PagCFBP13505_RS17850 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 PagCFBP13505_RS18405 Si-specific NAD(P)(+) transhydrogenase low > 74
Pantoea sp. MT58 0.52 IAI47_01350 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 IAI47_00935 Si-specific NAD(P)(+) transhydrogenase low > 76
Dickeya dianthicola 67-19 0.50 HGI48_RS00040 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 HGI48_RS20400 Si-specific NAD(P)(+) transhydrogenase low > 71
Klebsiella michiganensis M5al 0.50 BWI76_RS26605 16S rRNA (guanine(1516)-N(2))-methyltransferase 0.79 BWI76_RS00870 NAD(P)(+) transhydrogenase — —
Dickeya dianthicola ME23 0.50 DZA65_RS00030 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ 0.77 DZA65_RS21445 Si-specific NAD(P)(+) transhydrogenase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_1325 Protein of unknown function DUF548 0.62 Psyr_1901 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Pyridine nucleotide-disulfide oxidoreductase dimerization region — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_1325 Protein of unknown function DUF548 0.62 Psyr_1901 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Pyridine nucleotide-disulfide oxidoreductase dimerization region — —
Pseudomonas segetis P6 0.41 MPMX49_01631 Ribosomal RNA small subunit methyltransferase J 0.62 MPMX49_01854 Soluble pyridine nucleotide transhydrogenase low > 75
Pseudomonas sp. S08-1 0.41 OH686_06755 16S rRNA (guanine(1516)-N(2))-methyltransferase 0.62 OH686_22005 Soluble pyridine nucleotide transhydrogenase low > 80
Pseudomonas stutzeri RCH2 0.41 Psest_1563 Protein of unknown function (DUF548). 0.63 Psest_1663 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 67
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18790 Ribosomal RNA small subunit methyltransferase J 0.63 IKLFDK_15220 Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas aeruginosa MRSN321 0.40 DY961_RS14575 class I SAM-dependent methyltransferase 0.63 DY961_RS02010 sthA;go_function=NAD(P Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas sp. SVBP6 0.40 COO64_RS19535 class I SAM-dependent methyltransferase 0.62 COO64_RS09475 sthA Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3060 SAM-dependent methyltransferase (EC 2.1.1.-) 0.61 Pf1N1B4_3919 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_16350 SAM-dependent methyltransferase 0.61 AO353_00390 pyridine nucleotide-disulfide oxidoreductase — —
Pseudomonas aeruginosa PUPa3 0.40 DQ20_RS42550 class I SAM-dependent methyltransferase 0.63 DQ20_RS33570 sthA;go_function=NAD(P Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas sp. BP01 0.39 JOY50_RS26070 class I SAM-dependent methyltransferase 0.61 JOY50_RS25115 sthA Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas putida KT2440 0.39 PP_1513 Ribosomal RNA small subunit methyltransferase J 0.61 PP_2151 soluble pyridine nucleotide transhydrogenase — —
Pseudomonas orientalis W4I3 0.39 QF045_RS08950 class I SAM-dependent methyltransferase 0.61 QF045_RS10295 Si-specific NAD(P)(+) transhydrogenase — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4733 SAM-dependent methyltransferase (EC 2.1.1.-) 0.61 PfGW456L13_4024 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_06145 SAM-dependent methyltransferase 0.61 AO356_02250 pyridine nucleotide-disulfide oxidoreductase low > 104
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01390 Ribosomal RNA small subunit methyltransferase J 0.61 GEMAOFIL_01662 Soluble pyridine nucleotide transhydrogenase low > 96
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas sp. DMC3 0.38 GFF2031 Ribosomal RNA small subunit methyltransferase J 0.61 GFF1289 Soluble pyridine nucleotide transhydrogenase — —
Pseudomonas simiae WCS417 0.38 PS417_06100 SAM-dependent methyltransferase 0.61 PS417_07650 pyridine nucleotide-disulfide oxidoreductase — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3094 SAM-dependent methyltransferase (EC 2.1.1.-) 0.61 Pf6N2E2_2274 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 103
Alteromonas macleodii MIT1002 0.38 MIT1002_00112 Ribosomal RNA small subunit methyltransferase J 0.74 MIT1002_03373 Soluble pyridine nucleotide transhydrogenase low > 70
Pseudomonas sp. RS175 0.37 PFR28_00376 Ribosomal RNA small subunit methyltransferase J 0.61 PFR28_01127 Soluble pyridine nucleotide transhydrogenase low > 88

Not shown: 4 genomes with orthologs for CSW01_00395 only; 8 genomes with orthologs for CSW01_00765 only