Conservation of cofitness between CSW01_02770 and CSW01_00025 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02770 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1.0 CSW01_00025 membrane protein insertion efficiency factor YidD 0.44 9
Shewanella loihica PV-4 0.58 Shew_1860 alpha/beta hydrolase fold (RefSeq) 0.62 Shew_3867 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.57 Shewana3_1910 alpha/beta hydrolase fold (RefSeq) 0.63 Shewana3_0007 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO2473 hydrolase, alpha/beta fold family (NCBI ptt file) 0.63 SO0005 conserved hypothetical protein TIGR00278 (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.50 Sama_1645 alpha/beta hydrolase fold (RefSeq) 0.63 Sama_0010 hypothetical protein (RefSeq) low > 62
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS09135 alpha/beta fold hydrolase 0.48 PFLU_RS31225 membrane protein insertion efficiency factor YidD low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS09135 alpha/beta fold hydrolase 0.48 PFLU_RS31225 membrane protein insertion efficiency factor YidD 0.34 107
Pseudomonas orientalis W4I3 0.44 QF045_RS11770 alpha/beta fold hydrolase 0.48 QF045_RS02935 membrane protein insertion efficiency factor YidD — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0031 Alpha/beta hydrolase fold protein 0.47 Psyr_5135 Protein of unknown function DUF37 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0031 Alpha/beta hydrolase fold protein 0.47 Psyr_5135 Protein of unknown function DUF37 low > 86
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0642 hydrolase, alpha/beta fold family (TIGR) 0.47 DVU1076 conserved hypothetical protein TIGR00278 (TIGR) low > 55
Fusobacterium nucleatum SB010 0.32 HUW76_06840 alpha/beta hydrolase 0.50 HUW76_10770 membrane protein insertion efficiency factor YidD low > 35
Pseudomonas putida KT2440 0.16 PP_3645 putative L-proline amide hydrolase 0.47 PP_0007 conserved hypothetical protein low > 96
Pseudomonas sp. BP01 0.15 JOY50_RS07685 alpha/beta fold hydrolase 0.48 JOY50_RS08365 yidD membrane protein insertion efficiency factor YidD — —
Paraburkholderia graminis OAS925 0.15 ABIE53_004274 3-oxoadipate enol-lactonase 0.45 ABIE53_000335 putative membrane protein insertion efficiency factor low > 113
Pseudomonas aeruginosa MRSN321 0.14 DY961_RS22405 pcaD;go_function=3-oxoadipate 3-oxoadipate enol-lactonase 0.55 DY961_RS16410 yidD;inference=COORDINATES membrane protein insertion efficiency factor YidD low > 100
Pseudomonas aeruginosa PUPa3 0.14 DQ20_RS36920 pcaD;go_function=3-oxoadipate 3-oxoadipate enol-lactonase 0.55 DQ20_RS38735 yidD;inference=COORDINATES membrane protein insertion efficiency factor YidD 0.29 18
Pseudomonas aeruginosa PA14 0.14 IKLFDK_23025 3-oxoadipate enol-lactonase 0.55 IKLFDK_10005 membrane protein insertion efficiency factor YidD low > 98
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS32550 alpha/beta fold hydrolase 0.43 QEN71_RS29670 membrane protein insertion efficiency factor YidD low > 153
Pseudomonas segetis P6 0.14 ACVTMO_RS13475 pcaD 3-oxoadipate enol-lactonase 0.50 ACVTMO_RS01230 yidD membrane protein insertion efficiency factor YidD — —
Pseudomonas sp. SVBP6 0.14 COO64_RS24465 alpha/beta fold hydrolase 0.50 COO64_RS02095 yidD membrane protein insertion efficiency factor YidD low > 93
Rahnella sp. WP5 0.14 EX31_RS11200 alpha/beta fold hydrolase 0.57 EX31_RS25180 membrane protein insertion efficiency factor YidD low > 89
Cellulophaga baltica 18 0.13 M666_RS18785 alpha/beta hydrolase 0.44 M666_RS00380 membrane protein insertion efficiency factor YidD low > 67
Alteromonas macleodii MIT1002 0.13 MIT1002_03465 Putative aminoacrylate hydrolase RutD 0.60 MIT1002_04131 Putative membrane protein insertion efficiency factor low > 70
Dinoroseobacter shibae DFL-12 0.12 Dshi_1007 3-oxoadipate enol-lactonase (RefSeq) 0.45 Dshi_0331 protein of unknown function DUF37 (RefSeq) low > 64
Synechococcus elongatus PCC 7942 0.12 Synpcc7942_0774 esterase 0.43 Synpcc7942_1486 Protein of unknown function DUF37 low > 38
Pedobacter sp. GW460-11-11-14-LB5 0.12 CA265_RS12370 alpha/beta hydrolase 0.51 CA265_RS10955 membrane protein insertion efficiency factor YidD low > 88
Magnetospirillum magneticum AMB-1 0.12 AMB_RS13585 alpha/beta hydrolase 0.51 AMB_RS22030 membrane protein insertion efficiency factor YidD low > 64
Castellaniella sp019104865 MT123 0.11 ABCV34_RS02755 alpha/beta fold hydrolase 0.50 ABCV34_RS11885 membrane protein insertion efficiency factor YidD low > 48

Not shown: 42 genomes with orthologs for CSW01_02770 only; 20 genomes with orthologs for CSW01_00025 only