Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Caulobacter crescentus NA1000 Δfur | 1.0 | CCNA_02459 | | methylmalonyl-CoA mutase alpha subunit | 1.0 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | 0.82 | 1 |
Caulobacter crescentus NA1000 | 1.00 | CCNA_02459 | | methylmalonyl-CoA mutase alpha subunit | 1.00 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 66 |
Rhodopseudomonas palustris CGA009 | 0.77 | TX73_009435 | | methylmalonyl-CoA mutase | 0.19 | TX73_020345 | | GDP-mannose 4,6-dehydratase | low | > 86 |
Bosea sp. OAE506 | 0.77 | ABIE41_RS21625 | | methylmalonyl-CoA mutase | 0.65 | ABIE41_RS02850 | | dTDP-glucose 4,6-dehydratase | low | > 77 |
Azospirillum brasilense Sp245 | 0.76 | AZOBR_RS24250 | | methylmalonyl-CoA mutase | 0.61 | AZOBR_RS33415 | | dTDP-glucose 4 6-dehydratase | low | > 97 |
Rhodospirillum rubrum S1H | 0.76 | Rru_A2479 | | Methylmalonyl-CoA mutase-like (NCBI) | 0.64 | Rru_B0050 | | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 58 |
Mycobacterium tuberculosis H37Rv | 0.71 | Rv1493 | | Probable methylmalonyl-CoA mutase large subunit MutB (MCM) | 0.36 | Rv3464 | | dTDP-glucose 4,6-dehydratase RmlB | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.69 | CA264_20690 | | methylmalonyl-CoA mutase | 0.52 | CA264_17910 | | dTDP-glucose 4,6-dehydratase | — | — |
Bacteroides ovatus ATCC 8483 | 0.66 | BACOVA_03282 | | methylmalonyl-CoA mutase | 0.48 | BACOVA_03743 | | dTDP-glucose 4,6-dehydratase | low | > 94 |
Bacteroides thetaiotaomicron VPI-5482 | 0.66 | BT2090 | | methylmalonyl-CoA mutase large subunit (NCBI ptt file) | 0.47 | BT0466 | | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | low | > 81 |
Phocaeicola dorei CL03T12C01 | 0.66 | ABI39_RS01655 | | methylmalonyl-CoA mutase | 0.49 | ABI39_RS13370 | | dTDP-glucose 4,6-dehydratase | low | > 72 |
Phocaeicola vulgatus CL09T03C04 | 0.66 | HMPREF1058_RS02410 | | methylmalonyl-CoA mutase | 0.44 | HMPREF1058_RS02350 | | dTDP-glucose 4,6-dehydratase | — | — |
Bacteroides stercoris CC31F | 0.66 | HMPREF1181_RS08495 | | methylmalonyl-CoA mutase | 0.44 | HMPREF1181_RS08020 | | dTDP-glucose 4,6-dehydratase | — | — |
Parabacteroides merdae CL09T00C40 | 0.63 | HMPREF1078_RS14890 | | methylmalonyl-CoA mutase | 0.45 | HMPREF1078_RS00705 | | dTDP-glucose 4,6-dehydratase | — | — |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.63 | Echvi_4683 | | Methylmalonyl-CoA mutase, N-terminal domain/subunit | 0.48 | Echvi_2329 | | dTDP-glucose 4,6-dehydratase | — | — |
Variovorax sp. SCN45 | 0.62 | GFF931 | | Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2) | 0.52 | GFF6882 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
Variovorax sp. OAS795 | 0.62 | ABID97_RS13930 | | methylmalonyl-CoA mutase | 0.53 | ABID97_RS05660 | | dTDP-glucose 4,6-dehydratase | — | — |
Dechlorosoma suillum PS | 0.62 | Dsui_0519 | | Methylmalonyl-CoA mutase (EC 5.4.99.2) (from data) | 0.53 | Dsui_1948 | | dTDP-glucose 4,6-dehydratase | — | — |
Azospirillum sp. SherDot2 | 0.61 | MPMX19_05021 | | Methylmalonyl-CoA mutase | 0.63 | MPMX19_06725 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF4788 | | Methylmalonyl-CoA mutase (EC 5.4.99.2) | 0.53 | GFF1837 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
Dinoroseobacter shibae DFL-12 | 0.61 | Dshi_0726 | | methylmalonyl-CoA mutase, large subunit (RefSeq) | 0.59 | Dshi_4115 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.61 | PGA1_c21510 | | methylmalonyl-CoA mutase BhbA | 0.58 | PGA1_65p00240 | | dTDP-glucose 4,6-dehydratase RffG | — | — |
Acidovorax sp. GW101-3H11 | 0.61 | Ac3H11_2278 | | Methylmalonyl-CoA mutase (EC 5.4.99.2) | 0.53 | Ac3H11_1880 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.59 | Ga0059261_3988 | | Methylmalonyl-CoA mutase, N-terminal domain/subunit | 0.61 | Ga0059261_3099 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 68 |
Agrobacterium fabrum C58 | 0.58 | Atu3580 | | methylmalonyl-CoA mutase | 0.66 | Atu4617 | | dTDP-D-glucose-4,6-dehydratase | low | > 89 |
Sinorhizobium meliloti 1021 | 0.58 | SM_b20757 | | methylmalonyl-CoA mutase | 0.59 | SM_b21326 | | dTDP-D-glucose 4,6-dehydratase | low | > 103 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00799 | | Methylmalonyl-CoA mutase | 0.61 | OHPLBJKB_01660 | | dTDP-glucose 4,6-dehydratase 2 | low | > 73 |
Escherichia coli ECOR27 | 0.57 | NOLOHH_11350 | scpA | methylmalonyl-CoA mutase | 0.60 | NOLOHH_06695 | rffG | dTDP-glucose 4,6-dehydratase | low | > 75 |
Escherichia coli ECOR38 | 0.57 | HEPCGN_18745 | scpA | methylmalonyl-CoA mutase | 0.60 | HEPCGN_13270 | rffG | dTDP-glucose 4,6-dehydratase | low | > 87 |
Escherichia coli BL21 | 0.57 | ECD_02748 | | methylmalonyl-CoA mutase | 0.60 | ECD_01947 | | dTDP-glucose 4,6 dehydratase, NAD(P)-binding | low | > 61 |
Escherichia coli BW25113 | 0.57 | b2917 | yliK | methylmalonyl-CoA mutase (NCBI) | 0.60 | b3788 | rffG | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.57 | BNILDI_09885 | scpA | methylmalonyl-CoA mutase | 0.60 | BNILDI_04830 | rffG | dTDP-glucose 4,6-dehydratase | low | > 75 |
Rhizobium sp. OAE497 | 0.57 | ABIE40_RS21725 | | methylmalonyl-CoA mutase | 0.66 | ABIE40_RS08670 | | dTDP-glucose 4,6-dehydratase | low | > 107 |
Escherichia coli ECRC98 | 0.57 | JDDGAC_23085 | scpA | methylmalonyl-CoA mutase | 0.60 | JDDGAC_18185 | rffG | dTDP-glucose 4,6-dehydratase | low | > 86 |
Escherichia coli ECRC102 | 0.57 | NIAGMN_17210 | scpA | methylmalonyl-CoA mutase | 0.60 | NIAGMN_12315 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
Escherichia coli ECRC100 | 0.57 | OKFHMN_19445 | scpA | methylmalonyl-CoA mutase | 0.60 | OKFHMN_14560 | rffG | dTDP-glucose 4,6-dehydratase | low | > 80 |
Escherichia coli ECRC99 | 0.57 | KEDOAH_08695 | scpA | methylmalonyl-CoA mutase | 0.60 | KEDOAH_13590 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
Escherichia coli ECRC101 | 0.57 | MCAODC_09965 | scpA | methylmalonyl-CoA mutase | 0.60 | MCAODC_05065 | rffG | dTDP-glucose 4,6-dehydratase | low | > 87 |
Klebsiella michiganensis M5al | 0.56 | BWI76_RS23935 | | methylmalonyl-CoA mutase | 0.56 | BWI76_RS19065 | | dTDP-glucose 4,6-dehydratase | low | > 92 |
Paraburkholderia bryophila 376MFSha3.1 | 0.42 | H281DRAFT_01038 | | methylmalonyl-CoA mutase | 0.56 | H281DRAFT_04822 | | dTDP-glucose 4,6-dehydratase | — | — |
Not shown: 1 genomes with orthologs for CCNA_02459 only; 59 genomes with orthologs for CCNA_03744 only