Conservation of cofitness between BWI76_RS00940 and BWI76_RS05015 in Klebsiella michiganensis M5al

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS00940 transcriptional regulator HdfR 1.0 BWI76_RS05015 transcriptional regulator 0.38 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2907 HTH-type transcriptional regulator hdfR 0.98 GFF87 C4-type zinc finger protein, DksA/TraR family low > 78
Escherichia coli BL21 0.83 ECD_03642 flhDC operon transcriptional repressor 0.98 ECD_00144 transcriptional regulator of rRNA transcription; DnaK suppressor protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR 0.98 OHPLBJKB_03517 RNA polymerase-binding transcription factor DksA low > 73
Escherichia coli BW25113 0.83 b4480 hdfR transcriptional regulator HdfR (NCBI) 0.98 b0145 dksA DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) 0.58 4
Escherichia coli ECOR38 0.82 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR 0.98 HEPCGN_08295 dksA RNA polymerase-binding protein DksA low > 87
Escherichia coli Nissle 1917 0.82 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR 0.98 ECOLIN_RS00815 RNA polymerase-binding protein DksA — —
Escherichia fergusonii Becca 0.82 EFB2_04871 HTH-type transcriptional regulator HdfR 0.98 EFB2_03899 RNA polymerase-binding transcription factor DksA low > 86
Escherichia coli ECRC98 0.82 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR 0.98 JDDGAC_13940 dksA RNA polymerase-binding protein DksA low > 86
Escherichia coli ECRC102 0.82 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR 0.98 NIAGMN_08195 dksA RNA polymerase-binding protein DksA — —
Escherichia coli ECRC100 0.82 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR 0.98 OKFHMN_10345 dksA RNA polymerase-binding protein DksA low > 80
Escherichia coli ECRC101 0.82 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR 0.98 MCAODC_00860 dksA RNA polymerase-binding protein DksA low > 87
Escherichia coli ECRC99 0.82 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR 0.98 KEDOAH_17810 dksA RNA polymerase-binding protein DksA — —
Escherichia coli ECOR27 0.82 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR 0.98 NOLOHH_02690 dksA RNA polymerase-binding protein DksA 0.88 18
Escherichia coli ECRC62 0.82 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR 0.98 BNILDI_08980 dksA RNA polymerase-binding protein DksA 0.77 51
Enterobacter sp. TBS_079 0.82 MPMX20_04505 HTH-type transcriptional regulator HdfR 0.98 MPMX20_00831 RNA polymerase-binding transcription factor DksA low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4436 Transcriptional regulator 0.98 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family — —
Pantoea sp. MT58 0.64 IAI47_01000 HTH-type transcriptional regulator HdfR 0.96 IAI47_15635 RNA polymerase-binding protein DksA low > 76
Pectobacterium carotovorum WPP14 0.64 HER17_RS01040 HTH-type transcriptional regulator HdfR 0.95 HER17_RS05580 RNA polymerase-binding protein DksA low > 75
Erwinia tracheiphila SCR3 0.64 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR 0.95 LU632_RS20080 dksA RNA polymerase-binding protein DksA — —
Serratia liquefaciens MT49 0.63 IAI46_24385 HTH-type transcriptional regulator HdfR 0.95 IAI46_21210 RNA polymerase-binding protein DksA low > 86
Dickeya dadantii 3937 0.62 DDA3937_RS20190 HTH-type transcriptional regulator HdfR 0.96 DDA3937_RS15935 RNA polymerase-binding protein DksA — —
Rahnella sp. WP5 0.62 EX31_RS14970 HTH-type transcriptional regulator HdfR 0.96 EX31_RS03250 RNA polymerase-binding protein DksA 0.55 2
Dickeya dianthicola ME23 0.62 DZA65_RS21375 HTH-type transcriptional regulator HdfR 0.95 DZA65_RS17135 RNA polymerase-binding protein DksA — —
Dickeya dianthicola 67-19 0.62 HGI48_RS20335 HTH-type transcriptional regulator HdfR 0.95 HGI48_RS16050 RNA polymerase-binding protein DksA low > 71
Shewanella oneidensis MR-1 0.33 SO2202 transcriptional regulator, LysR family (NCBI ptt file) 0.82 SO0874 dksA DnaK suppressor protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.33 Shewana3_2403 LysR family transcriptional regulator (RefSeq) 0.82 Shewana3_3404 TraR/DksA family transcriptional regulator (RefSeq) low > 73
Shewanella amazonensis SB2B 0.32 Sama_1997 LysR family transcriptional regulator (RefSeq) 0.83 Sama_0780 TraR/DksA family transcriptional regulator (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19195 LysR family transcriptional regulator 0.82 CSW01_03155 RNA polymerase-binding transcription factor DksA low > 62
Shewanella loihica PV-4 0.26 Shew_2897 LysR family transcriptional regulator (RefSeq) 0.84 Shew_3129 TraR/DksA family transcriptional regulator (RefSeq) — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_2990 transcriptional regulator, LysR family (RefSeq) 0.36 Dshi_1884 transcriptional regulator, TraR/DksA family (RefSeq) — —
Pseudomonas fluorescens SBW25 0.19 PFLU_RS19485 LysR family transcriptional regulator 0.66 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS19485 LysR family transcriptional regulator 0.66 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Pseudomonas simiae WCS417 0.19 PS417_17700 LysR family transcriptional regulator 0.66 PS417_23875 molecular chaperone DnaK — —
Sinorhizobium meliloti 1021 0.19 SMc02596 transcriptional regulator 0.36 SMc00469 DnaK suppressor protein — —
Pseudomonas stutzeri RCH2 0.18 Psest_0802 Transcriptional regulator 0.65 Psest_1003 RNA polymerase-binding protein DksA — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2837 HTH-type transcriptional regulator hdfR 0.66 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_22745 LysR family transcriptional regulator 0.67 AO353_14420 molecular chaperone DnaK low > 101
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_00585 LysR family transcriptional regulator 0.68 AO356_16095 molecular chaperone DnaK low > 104
Pseudomonas putida KT2440 0.16 PP_2350 LysR family transcriptional regulator 0.62 PP_4693 RNA polymerase-binding transcription factor DksA low > 96
Pseudomonas sp. RS175 0.16 PFR28_01360 HTH-type transcriptional regulator HdfR 0.68 PFR28_03714 RNA polymerase-binding transcription factor DksA low > 88

Not shown: 4 genomes with orthologs for BWI76_RS00940 only; 18 genomes with orthologs for BWI76_RS05015 only