Conservation of cofitness between BPHYT_RS01650 and BPHYT_RS14560 in Burkholderia phytofirmans PsJN

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS01650 23S rRNA methyltransferase 1.0 BPHYT_RS14560 AraC family transcriptional regulator 0.31 17
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase 0.88 H281DRAFT_04325 transcriptional regulator, AraC family low > 103
Paraburkholderia graminis OAS925 0.94 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.89 ABIE53_003072 AraC-like DNA-binding protein 0.22 60
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase 0.75 QEN71_RS04420 AraC family transcriptional regulator low > 153
Ralstonia solanacearum GMI1000 0.75 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.22 RS_RS22500 AraC family transcriptional regulator low > 80
Shewanella amazonensis SB2B 0.49 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) 0.21 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.32 CSW01_19115 AraC family transcriptional regulator low > 62
Shewanella oneidensis MR-1 0.49 SO1149 hypothetical SAM-dependent methyltransferase (NCBI ptt file) 0.29 SO1762 transcriptional regulator, AraC/XylS family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_0977 SAM-dependent methyltransferase (RefSeq) 0.29 Shewana3_2693 AraC family transcriptional regulator (RefSeq) low > 73
Variovorax sp. SCN45 0.47 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.25 GFF535 Transcriptional regulator, AraC family low > 127
Klebsiella michiganensis M5al 0.47 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.27 BWI76_RS02715 putative helix-turn-helix AraC-type transcriptional regulator low > 92
Enterobacter sp. TBS_079 0.46 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.27 MPMX20_00488 HTH-type transcriptional activator RhaS low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.27 EX28DRAFT_3395 AraC-type DNA-binding domain-containing proteins low > 76
Pantoea sp. MT58 0.46 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.25 IAI47_17800 AraC family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.44 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.24 IAI46_13040 AraC family transcriptional regulator low > 86
Pseudomonas sp. RS175 0.26 PFR28_04274 Ribosomal RNA large subunit methyltransferase I 0.33 PFR28_02269 HTH-type transcriptional activator RhaS low > 88
Azospirillum sp. SherDot2 0.26 MPMX19_00203 Ribosomal RNA large subunit methyltransferase I 0.26 MPMX19_01511 HTH-type transcriptional activator RhaR low > 112
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS16890 class I SAM-dependent rRNA methyltransferase 0.24 ABZR86_RS22175 AraC family transcriptional regulator low > 74
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_977 LSU m5C1962 methyltransferase RlmI 0.36 PfGW456L13_988 FIG229276: Transcriptional regulator, AraC family low > 87
Pseudomonas putida KT2440 0.26 PP_5127 ribosomal RNA large subunit methyltransferase I 0.34 PP_2383 Transcriptional regulator, AraC family low > 96
Pseudomonas simiae WCS417 0.26 PS417_26880 SAM-dependent methyltransferase 0.20 PS417_14185 transcriptional regulator low > 88
Lysobacter sp. OAE881 0.26 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase 0.22 ABIE51_RS00570 AraC family transcriptional regulator low > 62
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_08330 SAM-dependent methyltransferase 0.36 AO353_08275 AraC family transcriptional regulator low > 101
Pseudomonas sp. S08-1 0.25 OH686_14110 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.36 OH686_19610 Transcriptional regulator, AraC family low > 80
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2307 LSU m5C1962 methyltransferase RlmI 0.37 Pf1N1B4_2318 FIG229276: Transcriptional regulator, AraC family low > 87
Pseudomonas fluorescens SBW25 0.25 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.21 PFLU_RS14425 AraC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.21 PFLU_RS14425 AraC family transcriptional regulator low > 109

Not shown: 55 genomes with orthologs for BPHYT_RS01650 only; 7 genomes with orthologs for BPHYT_RS14560 only