Conservation of cofitness between BNILDI_10480 and BNILDI_06435 in Escherichia coli ECRC62

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.0 BNILDI_06435 yjcH Inner membrane protein YjcH 0.74 16
Escherichia coli ECOR38 1.00 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.98 HEPCGN_11460 yjcH Inner membrane protein YjcH low > 87
Escherichia coli ECOR27 1.00 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 NOLOHH_05090 yjcH Inner membrane protein YjcH low > 75
Escherichia coli BL21 1.00 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA 1.00 ECD_03940 DUF485 family inner membrane protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase 1.00 OHPLBJKB_03972 Inner membrane protein YjcH low > 73
Escherichia coli BW25113 1.00 b2812 ygdL hypothetical protein (NCBI) 1.00 b4068 yjcH required for glycolate transport, with actP (from data) low > 76
Escherichia fergusonii Becca 0.99 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase 0.99 EFB2_04521 Inner membrane protein YjcH low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 ECOLIN_RS23545 DUF485 domain-containing protein low > 55
Escherichia coli ECRC99 0.99 KEDOAH_08035 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 KEDOAH_15310 yjcH DUF485 domain-containing protein — —
Escherichia coli ECRC101 0.98 MCAODC_10620 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 MCAODC_03350 yjcH DUF485 domain-containing protein low > 87
Escherichia coli ECRC100 0.98 OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 OKFHMN_12840 yjcH DUF485 domain-containing protein low > 80
Escherichia coli ECRC102 0.98 NIAGMN_17865 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 NIAGMN_10685 yjcH DUF485 domain-containing protein — —
Escherichia coli ECRC98 0.98 JDDGAC_23760 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 1.00 JDDGAC_16475 yjcH DUF485 domain-containing protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway 0.88 GFF1451 Putative membrane protein, clustering with ActP low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase 0.69 MPMX20_00290 Inner membrane protein YjcH low > 85
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.69 EX28DRAFT_4233 Predicted membrane protein low > 76
Klebsiella michiganensis M5al 0.89 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.70 BWI76_RS02090 membrane protein low > 92
Serratia liquefaciens MT49 0.84 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.69 IAI46_01400 DUF485 domain-containing protein low > 86
Rahnella sp. WP5 0.84 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.66 EX31_RS09045 DUF485 domain-containing protein low > 89
Pantoea sp. MT58 0.83 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.71 IAI47_17720 DUF485 domain-containing protein low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS05030 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.76 DDA3937_RS03475 DUF485 domain-containing protein low > 74
Pectobacterium carotovorum WPP14 0.80 HER17_RS16435 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.76 HER17_RS17635 DUF485 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS05035 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.76 HGI48_RS03575 DUF485 domain-containing protein low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.76 DZA65_RS03690 DUF485 domain-containing protein low > 75
Pseudomonas putida KT2440 0.53 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) 0.60 PP_1742 conserved inner membrane protein of unknown function low > 96
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS02715 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.30 QEN71_RS30455 DUF485 domain-containing protein low > 153
Pseudomonas stutzeri RCH2 0.51 Psest_1619 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.58 Psest_2939 Predicted membrane protein low > 67
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL 0.51 PfGW456L13_4276 Putative membrane protein, clustering with ActP low > 87
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.60 PFLU_RS08920 DUF485 domain-containing protein low > 109
Pseudomonas sp. S08-1 0.51 OH686_06545 HesA/MoeB/ThiF family protein 0.60 OH686_19835 Inner membrane protein YjcH, clustering with ActP low > 80
Pseudomonas fluorescens SBW25 0.51 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.60 PFLU_RS08920 DUF485 domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_06085 thiamine biosynthesis protein ThiF 0.59 AO356_19660 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.50 PS417_06165 thiamine biosynthesis protein ThiF 0.59 PS417_08860 small component of pyruvate transporter (yjcH-like) (from data) low > 88
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein 0.58 Psyr_3757 Protein of unknown function DUF485 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein 0.58 Psyr_3757 Protein of unknown function DUF485 low > 86
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16420 thiamine biosynthesis protein ThiF 0.60 AO353_01870 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL 0.58 Pf6N2E2_5848 small component of pyruvate transporter (yjcH-like) (from data) low > 103
Pseudomonas sp. RS175 0.50 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase 0.60 PFR28_03103 Inner membrane protein YjcH low > 88
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL 0.61 Pf1N1B4_3672 small component of pyruvate transporter (yjcH-like) (from data) low > 87
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09175 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA 0.40 ABZR87_RS07930 DUF485 domain-containing protein low > 80
Dechlorosoma suillum PS 0.46 Dsui_1346 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis 0.41 Dsui_0523 putative membrane protein low > 51
Acinetobacter radioresistens SK82 0.43 MPMX26_00481 tRNA threonylcarbamoyladenosine dehydratase 0.39 MPMX26_02899 Inner membrane protein YjcH low > 36
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.3494.1 Molybdopterin biosynthesis protein MoeB 0.33 Xcc-8004.5154.1 Putative membrane protein, clustering with ActP low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF4538 Probable HesA/MoeB/ThiF family protein 0.40 GFF3917 Putative membrane protein, clustering with ActP low > 90
Variovorax sp. SCN45 0.33 GFF289 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 0.37 GFF6924 protein of unknown function DUF485 low > 127
Castellaniella sp019104865 MT123 0.32 ABCV34_RS00665 tRNA threonylcarbamoyladenosine dehydratase 0.35 ABCV34_RS15775 DUF485 domain-containing protein — —

Not shown: 30 genomes with orthologs for BNILDI_10480 only; 5 genomes with orthologs for BNILDI_06435 only