Conservation of cofitness between Atu2333 and Atu3792 in Agrobacterium fabrum C58

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2333 ATP-dependent RNA helicase 1.0 Atu3792 L-asparagine permease 0.34 2
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0964 Superfamily II DNA and RNA helicases 0.07 Ga0059261_1577 L-glutamine and L-histidine transporter (from data) low > 68
Dickeya dadantii 3937 0.37 DDA3937_RS08645 ATP-dependent RNA helicase RhlE 0.57 DDA3937_RS04885 L-asparagine permease low > 74
Dickeya dianthicola 67-19 0.37 HGI48_RS08785 ATP-dependent RNA helicase RhlE 0.57 HGI48_RS04895 L-asparagine permease low > 71
Erwinia tracheiphila SCR3 0.37 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE 0.30 LU632_RS03070 aroP aromatic amino acid transporter AroP low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS00535 DEAD/DEAH box helicase 0.06 A4249_RS06560 amino acid permease — —
Dickeya dianthicola ME23 0.37 DZA65_RS09075 ATP-dependent RNA helicase RhlE 0.57 DZA65_RS05230 L-asparagine permease low > 75
Pectobacterium carotovorum WPP14 0.37 HER17_RS13325 ATP-dependent RNA helicase RhlE 0.56 HER17_RS16675 L-asparagine permease low > 75
Rahnella sp. WP5 0.37 EX31_RS23775 ATP-dependent RNA helicase RhlE 0.57 EX31_RS11630 L-asparagine permease low > 89
Enterobacter sp. TBS_079 0.37 MPMX20_01425 ATP-dependent RNA helicase RhlE 0.55 MPMX20_02406 L-asparagine permease 2 low > 85
Escherichia coli ECRC101 0.37 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE 0.57 OKFHMN_01510 ansP L-asparagine permease — —
Escherichia coli ECRC62 0.37 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE 0.57 BNILDI_17615 ansP L-asparagine permease — —
Escherichia coli BL21 0.37 ECD_00764 ATP-dependent RNA helicase 0.57 ECD_01410 L-asparagine transporter low > 60
Escherichia coli ECRC102 0.37 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE 0.57 NIAGMN_25645 ansP L-asparagine permease — —
Escherichia coli ECOR27 0.37 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE 0.57 NOLOHH_19180 ansP L-asparagine permease low > 57
Escherichia coli ECRC99 0.37 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE 0.57 KEDOAH_26930 ansP L-asparagine permease — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE 0.56 ECOLIN_RS08365 L-asparagine permease low > 52
Escherichia coli ECRC101 0.37 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE 0.57 MCAODC_16430 ansP L-asparagine permease — —
Escherichia coli BW25113 0.37 b0797 rhlE RNA helicase (NCBI) 0.57 b1453 ansP L-asparagine permease (VIMSS) low > 76
Escherichia fergusonii Becca 0.37 EFB2_03308 ATP-dependent RNA helicase RhlE 0.57 EFB2_02533 L-asparagine permease 2 low > 86
Escherichia coli ECRC98 0.37 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE 0.57 JDDGAC_04000 ansP L-asparagine permease — —
Escherichia coli ECOR38 0.37 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE 0.57 HEPCGN_26300 ansP L-asparagine permease low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02916 ATP-dependent RNA helicase RhlE 0.57 OHPLBJKB_02260 L-asparagine permease 2 low > 73
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2194 Superfamily II DNA and RNA helicases 0.56 EX28DRAFT_1045 Gamma-aminobutyrate permease and related permeases low > 76
Pantoea sp. MT58 0.36 IAI47_13435 ATP-dependent RNA helicase RhlE 0.56 IAI47_05330 L-asparagine permease low > 76
Ralstonia solanacearum GMI1000 0.35 RS_RS02695 RNA helicase 0.24 RS_RS08875 amino acid permease low > 80
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02870 RNA helicase 0.37 RR42_RS28305 L-threonine:H+ symporter (from data) low > 128
Ralstonia solanacearum PSI07 0.35 RPSI07_RS21325 RNA helicase 0.24 RPSI07_RS16335 amino acid permease low > 81
Paraburkholderia graminis OAS925 0.35 ABIE53_003462 ATP-dependent RNA helicase RhlE 0.30 ABIE53_003265 aromatic amino acid transport protein AroP low > 113
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04222 ATP-dependent RNA helicase RhlE 0.30 H281DRAFT_04042 phenylacetate transporter (from data) low > 103
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS07850 DEAD/DEAH box helicase 0.28 ABZR87_RS09765 amino acid permease low > 80
Ralstonia solanacearum UW163 0.34 UW163_RS01715 RNA helicase 0.34 UW163_RS22065 amino acid permease — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS02265 DEAD/DEAH box helicase 0.31 QEN71_RS03190 amino acid permease low > 153
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS11875 RNA helicase 0.34 RALBFv3_RS20930 amino acid permease low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_02200 DEAD/DEAH box helicase 0.07 CA264_12800 amino acid transporter low > 74
Castellaniella sp019104865 MT123 0.34 ABCV34_RS07925 DEAD/DEAH box helicase 0.27 ABCV34_RS10320 amino acid permease low > 48
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE 0.26 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter low > 74
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS08975 DEAD/DEAH box helicase 0.31 ABZR86_RS05185 amino acid permease low > 74
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02640 DEAD/DEAH box helicase 0.29 LRK54_RS02890 amino acid permease low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS02395 DEAD/DEAH box helicase 0.29 LRK55_RS02640 amino acid permease low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_09690 srmB RNA helicase 0.29 OKGIIK_09870 Amino acid permease 0.46 30

Not shown: 12 genomes with orthologs for Atu2333 only; 23 genomes with orthologs for Atu3792 only