Conservation of cofitness between Atu3903 and Atu1444 in Agrobacterium fabrum C58

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3903 nitrate ABC transporter ATPase 1.0 Atu1444 nitrogen regulation protein 0.20 9
Rhizobium sp. OAE497 0.92 ABIE40_RS25555 ABC transporter ATP-binding protein 0.70 ABIE40_RS09080 tRNA dihydrouridine synthase DusB low > 107
Sinorhizobium meliloti 1021 0.81 SMa0581 nitrate ABC transporter ATP-binding protein 0.71 SMc01041 NIFR3-like protein low > 103
Caulobacter crescentus NA1000 0.69 CCNA_00647 nitrate transport ATP-binding protein nrtD 0.38 CCNA_01813 tRNA-dihydrouridine synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_00647 nitrate transport ATP-binding protein nrtD 0.38 CCNA_01813 tRNA-dihydrouridine synthase low > 67
Pseudomonas stutzeri RCH2 0.67 Psest_0148 nitrate transport ATP-binding subunits C and D 0.37 Psest_1016 putative TIM-barrel protein, nifR3 family low > 67
Alteromonas macleodii MIT1002 0.66 MIT1002_00711 Bicarbonate transport ATP-binding protein CmpD 0.40 MIT1002_03957 putative tRNA-dihydrouridine synthase low > 70
Rahnella sp. WP5 0.64 EX31_RS09115 ABC transporter ATP-binding protein 0.35 EX31_RS12180 tRNA dihydrouridine synthase DusB low > 89
Dickeya dadantii 3937 0.62 DDA3937_RS14095 ABC transporter ATP-binding protein 0.35 DDA3937_RS01375 tRNA dihydrouridine synthase DusB low > 74
Enterobacter sp. TBS_079 0.62 MPMX20_02622 Bicarbonate transport ATP-binding protein CmpC 0.37 MPMX20_04169 tRNA-dihydrouridine synthase B low > 85
Pectobacterium carotovorum WPP14 0.62 HER17_RS07325 ABC transporter ATP-binding protein 0.36 HER17_RS20235 tRNA dihydrouridine synthase DusB low > 75
Dickeya dianthicola 67-19 0.62 HGI48_RS14095 ATP-binding cassette domain-containing protein 0.35 HGI48_RS01295 tRNA dihydrouridine synthase DusB low > 71
Klebsiella michiganensis M5al 0.62 BWI76_RS17370 nitrate transporter NasD 0.37 BWI76_RS25565 tRNA dihydrouridine synthase DusB
Enterobacter asburiae PDN3 0.61 EX28DRAFT_0844 nitrate transport ATP-binding subunits C and D 0.36 EX28DRAFT_3313 putative TIM-barrel protein, nifR3 family
Dickeya dianthicola ME23 0.61 DZA65_RS14755 ABC transporter ATP-binding protein 0.35 DZA65_RS01355 tRNA dihydrouridine synthase DusB low > 75
Pantoea sp. MT58 0.61 IAI47_11175 ABC transporter ATP-binding protein 0.33 IAI47_02385 tRNA dihydrouridine synthase DusB low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3669 Nitrate ABC transporter, ATP-binding protein 0.38 GFF634 tRNA dihydrouridine synthase B (EC 1.-.-.-)
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS06065 nitrate ABC transporter ATP-binding protein 0.34 HSERO_RS02050 tRNA-dihydrouridine synthase B low > 78
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_5098 Nitrate ABC transporter, ATP-binding protein 0.35 Pf1N1B4_1313 tRNA dihydrouridine synthase B (EC 1.-.-.-)
Variovorax sp. OAS795 0.60 ABID97_RS20570 ABC transporter ATP-binding protein 0.37 ABID97_RS24735 tRNA dihydrouridine synthase DusB low > 91
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS06890 ABC transporter ATP-binding protein 0.36 ABZR87_RS07650 tRNA dihydrouridine synthase DusB low > 80
Variovorax sp. SCN45 0.59 GFF4735 Nitrate ABC transporter, ATP-binding protein 0.37 GFF2144 tRNA-dihydrouridine synthase DusB low > 127
Pseudomonas sp. S08-1 0.59 OH686_04025 Nitrate ABC transporter, ATP-binding protein 0.37 OH686_07610 tRNA-dihydrouridine synthase DusB low > 80
Acidovorax sp. GW101-3H11 0.59 Ac3H11_3222 Nitrate ABC transporter, ATP-binding protein 0.33 Ac3H11_3996 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 79
Ralstonia solanacearum PSI07 0.59 RPSI07_RS22280 ABC transporter ATP-binding protein 0.36 RPSI07_RS21520 tRNA dihydrouridine synthase DusB low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS01865 ABC transporter ATP-binding protein 0.35 RS_RS02515 tRNA dihydrouridine synthase DusB low > 80
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS11025 ABC transporter ATP-binding protein 0.36 RALBFv3_RS11695 tRNA dihydrouridine synthase DusB
Ralstonia solanacearum UW163 0.58 UW163_RS02555 ABC transporter ATP-binding protein 0.36 UW163_RS01890 tRNA dihydrouridine synthase DusB
Dechlorosoma suillum PS 0.58 Dsui_1833 nitrate transport ATP-binding subunits C and D 0.38 Dsui_1593 putative TIM-barrel protein, nifR3 family low > 51
Marinobacter adhaerens HP15 0.46 HP15_1014 nitrate ABC transporter, ATPase subunits C and D 0.38 HP15_3225 tRNA-dihydrouridine synthase B low > 73
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1095 nitrate transport ATP-binding subunits C and D 0.28 Echvi_1531 putative TIM-barrel protein, nifR3 family low > 79
Rhodopseudomonas palustris CGA009 0.44 TX73_010895 ABC transporter ATP-binding protein 0.51 TX73_013410 tRNA dihydrouridine synthase DusB low > 86

Not shown: 2 genomes with orthologs for Atu3903 only; 53 genomes with orthologs for Atu1444 only