Conservation of cofitness between Atu1688 and Atu0099 in Agrobacterium fabrum C58

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1688 indole-3-glycerol-phosphate synthase 1.0 Atu0099 prephenate dehydratase 0.88 7
Rhizobium sp. OAE497 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.86 ABIE40_RS00245 prephenate dehydratase — —
Sinorhizobium meliloti 1021 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.85 SMc02899 prephenate dehydratase 0.73 50
Rhodopseudomonas palustris CGA009 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.65 TX73_019145 prephenate dehydratase — —
Bosea sp. OAE506 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.56 ABIE41_RS23945 prephenate dehydratase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.52 PGA1_c30200 prephenate dehydratase — —
Azospirillum sp. SherDot2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.54 MPMX19_02162 Bifunctional chorismate mutase/prephenate dehydratase 0.69 33
Caulobacter crescentus NA1000 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.48 CCNA_03028 prephenate dehydratase 0.84 46
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.48 CCNA_03028 prephenate dehydratase low > 67
Dinoroseobacter shibae DFL-12 0.53 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.55 Dshi_0653 Prephenate dehydratase (RefSeq) — —
Azospirillum brasilense Sp245 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.54 AZOBR_RS03855 prephenate dehydratase 0.87 16
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.44 Ga0059261_2269 Prephenate dehydratase 0.96 10
Magnetospirillum magneticum AMB-1 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.56 AMB_RS21090 prephenate dehydratase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.49 Rru_A3162 Prephenate dehydratase (NCBI) 0.93 7
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.22 CA265_RS11630 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) 0.40 62
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.13 Synpcc7942_0881 pheA prephenate dehydratase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.22 BT3936 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) 0.77 36
Bacteroides ovatus ATCC 8483 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase 0.22 BACOVA_01162 prephenate dehydratase 0.91 26
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase 0.22 Echvi_0123 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) — —
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.24 HMPREF1078_RS01135 prephenate dehydratase 0.94 30
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.24 ABZR88_RS07010 prephenate dehydratase — —
Mycobacterium tuberculosis H37Rv 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.17 Rv3838c Prephenate dehydratase PheA — —
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.23 HMPREF1181_RS06560 prephenate dehydratase 0.88 19
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.23 ABI39_RS10510 prephenate dehydratase 0.80 7
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.24 HMPREF1058_RS14795 prephenate dehydratase 0.90 10
Methanococcus maripaludis S2 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC 0.19 MMP_RS07850 prephenate dehydratase — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC 0.20 MMJJ_RS06505 prephenate dehydratase — —

Not shown: 41 genomes with orthologs for Atu1688 only; 1 genomes with orthologs for Atu0099 only