| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E3 | 1.0 | AO353_22890 | | secretion protein HlyD | 1.0 | AO353_02440 | | peptidase S41 | 0.35 | 7 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_3267 | | RND transporter, membrane fusion protein | 0.94 | PfGW456L13_4207 | | Periplasmic protease | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.82 | Pf1N1B4_4664 | | RND transporter, membrane fusion protein | 0.94 | Pf1N1B4_3741 | | Periplasmic protease | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.81 | AO356_25870 | | secretion protein HlyD | 0.93 | AO356_19335 | | peptidase S41 | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.81 | Pf6N2E2_1273 | | Probable RND efflux membrane fusion protein | 0.93 | Pf6N2E2_5780 | | Periplasmic protease | low | > 103 |
| Pseudomonas sp. RS175 | 0.80 | PFR28_02195 | | Multidrug resistance protein MdtA | 0.92 | PFR28_03169 | | Tail-specific protease | low | > 88 |
| Pseudomonas simiae WCS417 | 0.79 | PS417_12740 | | secretion protein HlyD | 0.91 | PS417_09325 | | peptidase S41 | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.78 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.92 | PFLU_RS09980 | | peptidase S41 | 0.22 | 30 |
| Pseudomonas fluorescens SBW25 | 0.78 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.92 | PFLU_RS09980 | | peptidase S41 | 0.40 | 77 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.65 | Psyr_2482 | | Secretion protein HlyD | 0.87 | Psyr_1599 | | C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.65 | Psyr_2482 | | Secretion protein HlyD | 0.87 | Psyr_1599 | | C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A | low | > 86 |
| Pseudomonas putida KT2440 | 0.61 | PP_3585 | | multidrug efflux transport system - putative membrane fusion protein | 0.88 | PP_1719 | | Tail-specific protease prc | 0.13 | 67 |
| Pseudomonas stutzeri RCH2 | 0.55 | Psest_2138 | | RND family efflux transporter, MFP subunit | 0.75 | Psest_2951 | | C-terminal peptidase (prc) | — | — |
| Pseudomonas sp. S08-1 | 0.51 | OH686_00920 | | Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA | 0.74 | OH686_19710 | | Tail-specific protease precursor | low | > 80 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_0484 | | RND family efflux transporter, MFP subunit | 0.33 | EX28DRAFT_0726 | | C-terminal peptidase (prc) | low | > 76 |
| Pantoea sp. MT58 | 0.40 | IAI47_06875 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.34 | IAI47_08705 | | carboxy terminal-processing peptidase | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_01630 | | Multidrug resistance protein MdtA | 0.35 | OHPLBJKB_01901 | | Tail-specific protease | low | > 73 |
| Escherichia coli BW25113 | 0.40 | b2074 | b2074 | putative membrane protein (VIMSS) | 0.34 | b1830 | prc | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_14460 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | BNILDI_15770 | prc | carboxy terminal-processing peptidase | low | > 75 |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_24200 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | OKFHMN_26465 | prc | carboxy terminal-processing peptidase | low | > 80 |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_28310 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | JDDGAC_01040 | prc | carboxy terminal-processing peptidase | low | > 86 |
| Escherichia coli BL21 | 0.40 | ECD_01979 | | multidrug efflux system, subunit A | 0.35 | ECD_01801 | | carboxy-terminal protease for penicillin-binding protein 3 | low | > 61 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_20740 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | MCAODC_18940 | prc | carboxy terminal-processing peptidase | low | > 87 |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_22145 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | NIAGMN_01595 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_03950 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | KEDOAH_01640 | prc | carboxy terminal-processing peptidase | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_15545 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | NOLOHH_16975 | prc | carboxy terminal-processing peptidase | low | > 75 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_02890 | mdtA | multidrug efflux RND transporter subunit MdtA | 0.35 | HEPCGN_04865 | prc | carboxy terminal-processing peptidase | low | > 87 |
| Enterobacter sp. TBS_079 | 0.39 | MPMX20_03060 | | Multidrug resistance protein MdtA | 0.33 | MPMX20_02737 | | Tail-specific protease | low | > 85 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS12195 | | multidrug efflux RND transporter subunit MdtA | 0.35 | ECOLIN_RS10190 | | carboxy terminal-processing peptidase | — | — |
| Escherichia fergusonii Becca | 0.39 | EFB2_01781 | | Multidrug resistance protein MdtA | 0.34 | EFB2_02171 | | Tail-specific protease | low | > 86 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS19250 | | multidrug transporter subunit MdtA | 0.35 | BWI76_RS17975 | | tail-specific protease | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF3855 | | Multidrug transporter MdtA | 0.34 | GFF2845 | | Tail-specific protease precursor (EC 3.4.21.102) | low | > 78 |
| Dickeya dadantii 3937 | 0.38 | DDA3937_RS15260 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.35 | DDA3937_RS11965 | | carboxy terminal-processing peptidase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.38 | HGI48_RS15340 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.35 | HGI48_RS12055 | | carboxy terminal-processing peptidase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.37 | HER17_RS06325 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.34 | HER17_RS11690 | | carboxy terminal-processing peptidase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.37 | LU632_RS08695 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.32 | LU632_RS13250 | prc | carboxy terminal-processing peptidase | — | — |
| Dickeya dianthicola ME23 | 0.36 | DZA65_RS16160 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.35 | DZA65_RS12505 | | carboxy terminal-processing peptidase | low | > 75 |
| Rahnella sp. WP5 | 0.36 | EX31_RS13385 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.34 | EX31_RS24880 | | carboxy terminal-processing peptidase | low | > 89 |
| Serratia liquefaciens MT49 | 0.36 | IAI46_18970 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | 0.35 | IAI46_10800 | | carboxy terminal-processing peptidase | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.4791.1 | | Probable Co/Zn/Cd efflux system membrane fusion protein | 0.33 | Xcc-8004.914.1 | | tail-specific protease | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS16315 | | efflux RND transporter periplasmic adaptor subunit | 0.39 | ABZR86_RS17510 | | carboxy terminal-processing peptidase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_16100 | | HlyD-D23 domain-containing protein | 0.38 | OKGIIK_00110 | ctpA | C-terminal processing protease CtpA/Prc, contains a PDZ domain | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.26 | LRK55_RS09500 | | efflux RND transporter periplasmic adaptor subunit | 0.38 | LRK55_RS06215 | | carboxy terminal-processing peptidase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.26 | LRK54_RS09840 | | efflux RND transporter periplasmic adaptor subunit | 0.38 | LRK54_RS06470 | | carboxy terminal-processing peptidase | 0.51 | 32 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.18 | ABZR88_RS03045 | | efflux RND transporter periplasmic adaptor subunit | 0.40 | ABZR88_RS20305 | | carboxy terminal-processing peptidase | low | > 71 |
Not shown: 17 genomes with orthologs for AO353_22890 only; 12 genomes with orthologs for AO353_02440 only