Conservation of cofitness between ABZR87_RS10885 and ABZR87_RS20235 in Ralstonia sp. UNC404CL21Col

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 1.0 ABZR87_RS20235 type VI secretion system contractile sheath large subunit 0.42 9
Ralstonia solanacearum PSI07 0.94 RPSI07_RS18130 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.91 RPSI07_RS02925 type VI secretion system contractile sheath large subunit low > 81
Ralstonia solanacearum GMI1000 0.94 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.90 RS_RS20675 type VI secretion system contractile sheath large subunit low > 80
Ralstonia solanacearum IBSBF1503 0.93 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.90 RALBFv3_RS20050 type VI secretion system contractile sheath large subunit low > 76
Ralstonia solanacearum UW163 0.93 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.90 UW163_RS19125 type VI secretion system contractile sheath large subunit — —
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS22225 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.89 QEN71_RS31700 type VI secretion system contractile sheath large subunit low > 153
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS09125 23S rRNA methyltransferase 0.87 BPHYT_RS24400 EvpB family type VI secretion protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_00846 23S rRNA m(5)U-1939 methyltransferase 0.88 H281DRAFT_05364 type VI secretion system protein ImpC low > 103
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS14825 23S rRNA methyltransferase 0.84 HSERO_RS20175 EvpB family type VI secretion protein low > 78
Variovorax sp. SCN45 0.54 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) 0.52 GFF3012 T6SS component TssC (ImpC/VipB) low > 127
Marinobacter adhaerens HP15 0.40 HP15_790 23S rRNA 5-methyluridine methyltransferase 0.39 HP15_3475 protein containing DUF877 low > 73
Acinetobacter radioresistens SK82 0.34 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.70 MPMX26_00963 hypothetical protein low > 36
Pectobacterium carotovorum WPP14 0.32 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 HER17_RS04845 type VI secretion system contractile sheath large subunit low > 75
Rahnella sp. WP5 0.31 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.56 EX31_RS00950 type VI secretion system contractile sheath large subunit low > 89
Dickeya dadantii 3937 0.30 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 DDA3937_RS07020 type VI secretion system contractile sheath large subunit low > 74
Serratia liquefaciens MT49 0.30 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.56 IAI46_05535 type VI secretion system contractile sheath large subunit low > 86
Pseudomonas stutzeri RCH2 0.30 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.39 Psest_0132 type VI secretion protein, EvpB/VC_A0108 family low > 67
Dickeya dianthicola ME23 0.29 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 DZA65_RS08545 type VI secretion system contractile sheath large subunit low > 75
Pseudomonas putida KT2440 0.29 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.69 PP_3099 uricase/urate oxidase low > 96
Pantoea sp. MT58 0.29 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.56 IAI47_14285 type VI secretion system contractile sheath large subunit low > 76
Dickeya dianthicola 67-19 0.29 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 HGI48_RS07950 type VI secretion system contractile sheath large subunit low > 71
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.56 Pf1N1B4_4537 Uncharacterized protein ImpC low > 87
Pseudomonas sp. RS175 0.28 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.56 PFR28_02385 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.56 Pf6N2E2_554 Uncharacterized protein ImpC low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.69 Psyr_4954 Protein of unknown function DUF877 low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.69 Psyr_4954 Protein of unknown function DUF877 low > 86
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_19055 23S rRNA methyltransferase 0.56 AO356_24345 EvpB family type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_02715 23S rRNA methyltransferase 0.56 AO353_21550 EvpB family type VI secretion protein low > 101
Agrobacterium fabrum C58 0.13 Atu0735 RNA methyltransferase 0.52 Atu4341 hypothetical protein low > 89
Azospirillum brasilense Sp245 0.13 AZOBR_RS01195 RNA methyltransferase 0.58 AZOBR_RS21245 EvpB family type VI secretion protein low > 97
Azospirillum sp. SherDot2 0.13 MPMX19_02196 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.57 MPMX19_03422 hypothetical protein low > 112

Not shown: 65 genomes with orthologs for ABZR87_RS10885 only; 1 genomes with orthologs for ABZR87_RS20235 only