Conservation of cofitness between Sama_1376 and Sama_3334 in Shewanella amazonensis SB2B

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1376 methylmalonate-semialdehyde dehydrogenase (RefSeq) 1.0 Sama_3334 ornithine decarboxylase (RefSeq) 0.50 8
Shewanella sp. ANA-3 0.89 Shewana3_2770 methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) 0.89 Shewana3_3871 ornithine decarboxylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.88 SO1678 mmsA methylmalonate-semialdehyde dehydrogenase (NCBI ptt file) 0.88 SO0314 speF ornithine decarboxylase, inducible (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_05990 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.24 AO353_23560 lysine decarboxylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1229 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.24 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 87
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_5146 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.24 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 87
Pseudomonas simiae WCS417 0.58 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.24 PS417_12240 lysine decarboxylase low > 88
Pseudomonas fluorescens SBW25 0.58 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.24 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS25540 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.24 PFLU_RS12930 lysine decarboxylase low > 109
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS24025 methylmalonate-semialdehyde dehydrogenase 0.25 RR42_RS15940 lysine decarboxylase — —
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS12395 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.46 QEN71_RS33025 ornithine decarboxylase low > 153
Pseudomonas putida KT2440 0.58 PP_4667 methylmalonate-semialdehyde dehydrogenase 0.24 PP_4140 lysine decarboxylase low > 96
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_01202 methylmalonate-semialdehyde dehydrogenase [acylating] 0.25 H281DRAFT_00160 ornithine decarboxylase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS17470 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.24 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase low > 80
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS28030 methylmalonate-semialdehyde dehydrogenase 0.24 BPHYT_RS04980 lysine decarboxylase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS20230 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.24 RS_RS11875 lysine decarboxylase — —
Variovorax sp. OAS795 0.56 ABID97_RS19425 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.22 ABID97_RS16535 arginine/lysine/ornithine decarboxylase low > 91
Variovorax sp. SCN45 0.56 GFF7377 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.22 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) low > 127
Pseudomonas sp. S08-1 0.55 OH686_05865 methylmalonate-semialdehyde dehydrogenase (acylating) 0.25 OH686_03560 Lysine decarboxylase, inducible low > 80
Ralstonia solanacearum UW163 0.55 UW163_RS18765 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.24 UW163_RS09345 lysine decarboxylase — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS20410 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.24 RALBFv3_RS04325 lysine decarboxylase — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS02330 methylmalonate-semialdehyde dehydrogenase (CoA acylating) 0.24 RPSI07_RS13045 lysine decarboxylase — —
Pseudomonas stutzeri RCH2 0.54 Psest_2436 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) 0.24 Psest_2075 Arginine/lysine/ornithine decarboxylases low > 67
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2357 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) 0.24 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS15395 methylmalonate-semialdehyde dehydrogenase 0.24 HSERO_RS17280 lysine decarboxylase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS08280 CoA-acylating methylmalonate-semialdehyde dehydrogenase 0.22 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase — —

Not shown: 10 genomes with orthologs for Sama_1376 only; 35 genomes with orthologs for Sama_3334 only