Conservation of cofitness between Sama_0176 and Sama_3018 in Shewanella amazonensis SB2B

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0176 general secretion pathway protein K (RefSeq) 1.0 Sama_3018 sspA stringent starvation protein A (RefSeq) 0.60 8
Shewanella sp. ANA-3 0.76 Shewana3_0158 general secretion pathway protein K (RefSeq) 0.93 Shewana3_0604 sspA stringent starvation protein A (RefSeq) — —
Shewanella oneidensis MR-1 0.76 SO0173 gspK general secretion pathway protein K (NCBI ptt file) 0.92 SO0611 sspA stringent starvation protein a (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.74 Shew_3612 general secretion pathway protein K (RefSeq) 0.90 Shew_0573 sspA stringent starvation protein A (RefSeq) — —
Alteromonas macleodii MIT1002 0.31 MIT1002_03983 Putative general secretion pathway protein K 0.74 MIT1002_00817 Stringent starvation protein A — —
Dickeya dianthicola 67-19 0.30 HGI48_RS14700 type II secretion system minor pseudopilin GspK 0.74 HGI48_RS01545 stringent starvation protein A low > 71
Dickeya dadantii 3937 0.30 DDA3937_RS14765 type II secretion system minor pseudopilin GspK 0.74 DDA3937_RS01645 stringent starvation protein A low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS15645 type II secretion system minor pseudopilin GspK 0.74 DZA65_RS01615 stringent starvation protein A low > 75
Pectobacterium carotovorum WPP14 0.29 HER17_RS06720 type II secretion system minor pseudopilin GspK 0.75 HER17_RS19935 stringent starvation protein A low > 75
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_13755 type II secretion system protein K 0.68 CSW01_03060 stringent starvation protein A — —
Escherichia coli BL21 0.26 ECD_02831 putative type II secretion protein GspK 0.72 ECD_03089 stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase-like protein low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00746 Putative type II secretion system protein K 0.72 OHPLBJKB_00475 Stringent starvation protein A low > 73
Escherichia fergusonii Becca 0.24 EFB2_00852 Putative type II secretion system protein K 0.72 EFB2_00601 Stringent starvation protein A low > 86
Escherichia coli ECOR38 0.24 HEPCGN_18085 gspK general secretion pathway protein K 0.72 HEPCGN_16705 sspA stringent starvation protein A low > 85
Escherichia coli ECOR27 0.24 NOLOHH_11010 gspK general secretion pathway protein K 0.72 NOLOHH_09630 sspA stringent starvation protein A low > 57
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0696 Type II secretory pathway, component PulK 0.66 B158DRAFT_2103 Glutathione S-transferase low > 40
Pseudomonas stutzeri RCH2 0.22 Psest_4196 Type II secretory pathway, component PulK 0.52 Psest_3276 Glutathione S-transferase — —
Escherichia coli ECRC101 0.22 OKFHMN_00250 gspK type II secretion system minor pseudopilin GspK 0.72 OKFHMN_17830 sspA stringent starvation protein A — —
Escherichia coli ECRC98 0.22 JDDGAC_30330 gspK type II secretion system minor pseudopilin GspK 0.72 JDDGAC_21455 sspA stringent starvation protein A — —
Escherichia coli ECRC101 0.22 MCAODC_15300 gspK type II secretion system minor pseudopilin GspK 0.72 MCAODC_08350 sspA stringent starvation protein A — —
Escherichia coli ECRC102 0.22 NIAGMN_28570 gspK type II secretion system minor pseudopilin GspK 0.72 NIAGMN_15590 sspA stringent starvation protein A — —
Marinobacter adhaerens HP15 0.21 HP15_1608 general secretion pathway protein K-like protein 0.62 HP15_548 glutathione S-transferase, N-terminal domain protein — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.949.1 General secretion pathway protein K 0.49 Xcc-8004.2231.1 Stringent starvation protein A low > 74
Pseudomonas sp. S08-1 0.21 OH686_11755 General secretion pathway protein K 0.54 OH686_08375 Stringent starvation protein A low > 80
Klebsiella michiganensis M5al 0.20 BWI76_RS05055 type II secretion system protein K 0.71 BWI76_RS25335 stringent starvation protein A low > 92
Escherichia coli BW25113 0.19 b3332 gspK general secretory pathway component, cryptic (NCBI) 0.72 b3229 sspA stringent starvation protein A (NCBI) low > 76
Acinetobacter radioresistens SK82 0.19 MPMX26_01229 Type II secretion system protein K 0.35 MPMX26_00591 Stringent starvation protein A — —
Rahnella sp. WP5 0.16 EX31_RS16200 type II secretion system minor pseudopilin GspK 0.73 EX31_RS12500 stringent starvation protein A low > 89
Enterobacter asburiae PDN3 0.15 EX28DRAFT_2072 Type II secretory pathway, component PulK 0.70 EX28DRAFT_3278 Glutathione S-transferase low > 76
Pseudomonas putida KT2440 0.13 PP_1042 Type II secretion system protein K 0.54 PP_1320 stringent starvation protein A low > 96
Pseudomonas fluorescens FW300-N2E3 0.11 AO353_12580 type II secretory protein PulK 0.53 AO353_15260 stringent starvation protein A low > 101
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_24775 HxcX atypical pseudopilin 0.51 AO356_17080 stringent starvation protein A low > 104
Ralstonia sp. UNC404CL21Col 0.09 ABZR87_RS03430 type II secretion system minor pseudopilin GspK 0.36 ABZR87_RS02370 glutathione S-transferase N-terminal domain-containing protein — —
Pseudomonas fluorescens SBW25 0.09 PFLU_RS15765 general secretion pathway protein GspK 0.52 PFLU_RS04210 stringent starvation protein A low > 109
Pseudomonas fluorescens SBW25-INTG 0.09 PFLU_RS15765 general secretion pathway protein GspK 0.52 PFLU_RS04210 stringent starvation protein A low > 109
Cupriavidus basilensis FW507-4G11 0.09 RR42_RS19500 general secretion pathway protein GspK 0.36 RR42_RS18810 stringent starvation protein A — —
Pseudomonas fluorescens FW300-N2E2 0.08 Pf6N2E2_648 General secretion pathway protein K 0.51 Pf6N2E2_5340 Stringent starvation protein A low > 103
Pseudomonas simiae WCS417 0.08 PS417_11280 HxcX atypical pseudopilin 0.52 PS417_04170 stringent starvation protein A low > 88

Not shown: 2 genomes with orthologs for Sama_0176 only; 35 genomes with orthologs for Sama_3018 only