| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT0682 | | two-component system response regulator (NCBI ptt file) | 1.0 | BT0884 | | outer membrane efflux protein oprM precursor (NCBI ptt file) | 0.37 | 14 |
| Bacteroides ovatus ATCC 8483 | 0.86 | BACOVA_02385 | | response regulator receiver domain protein | 0.92 | BACOVA_02605 | | efflux transporter, outer membrane factor lipoprotein, NodT family | low | > 94 |
| Phocaeicola dorei CL03T12C01 | 0.72 | ABI39_RS05370 | | response regulator transcription factor | 0.67 | ABI39_RS01700 | | TolC family protein | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.66 | HMPREF1078_RS01665 | | response regulator transcription factor | 0.68 | HMPREF1078_RS07680 | | TolC family protein | low | > 61 |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_02319 | | Transcriptional regulatory protein CusR | 0.24 | MPMX20_01451 | | Toluene efflux pump outer membrane protein TtgI | low | > 85 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_1165 | | heavy metal response regulator | 0.24 | EX28DRAFT_2165 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS03595 | | copper/silver response regulator transcription factor SilR | 0.18 | DZA65_RS08525 | | efflux transporter outer membrane subunit | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS15305 | | heavy metal response regulator transcription factor | 0.23 | QEN71_RS07915 | | TolC family protein | low | > 153 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_18460 | | transcriptional regulator | 0.23 | PS417_00665 | | RND transporter | low | > 88 |
| Pseudomonas putida KT2440 | 0.37 | PP_1438 | | response regulator | 0.24 | PP_1273 | | putative Multidrug efflux MFS outer membrane protein | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.37 | AO353_28575 | | transcriptional regulator | 0.22 | AO353_11235 | | RND transporter | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.37 | Psyr_1497 | | Heavy metal response regulator | 0.20 | Psyr_2969 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS20435 | | heavy metal response regulator transcription factor | 0.23 | PFLU_RS00675 | | efflux transporter outer membrane subunit | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.37 | Psyr_1497 | | Heavy metal response regulator | 0.20 | Psyr_2969 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Variovorax sp. SCN45 | 0.37 | GFF4042 | | Copper-sensing two-component system response regulator CusR | 0.21 | GFF3508 | | Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system | low | > 127 |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS20435 | | heavy metal response regulator transcription factor | 0.23 | PFLU_RS00675 | | efflux transporter outer membrane subunit | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS12420 | | transcriptional regulator | 0.21 | HSERO_RS15975 | | RND transporter | low | > 78 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_22680 | | Copper-sensing two-component system response regulator CusR | 0.22 | OH686_00935 | | Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system | low | > 80 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS10810 | | response regulator transcription factor | 0.17 | A4249_RS09920 | | TolC family protein | low | > 48 |
| Dechlorosoma suillum PS | 0.36 | Dsui_2644 | | heavy metal response regulator | 0.25 | Dsui_3175 | | efflux transporter, outer membrane factor lipoprotein, NodT family | — | — |
| Pseudomonas sp. RS175 | 0.36 | PFR28_01522 | | Transcriptional activator protein CzcR | 0.24 | PFR28_04798 | | putative efflux pump outer membrane protein TtgC | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_4017 | | Copper-sensing two-component system response regulator CusR | 0.23 | PfGW456L13_524 | | Outer membrane component of tripartite multidrug resistance system | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_26830 | | transcriptional regulator | 0.21 | AO356_27610 | | RND transporter | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.36 | Pf1N1B4_4017 | | DNA-binding heavy metal response regulator | 0.25 | Pf1N1B4_4831 | | Outer membrane protein assembly factor YaeT precursor | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS13650 | | heavy metal response regulator transcription factor | 0.19 | HER17_RS07525 | | efflux transporter outer membrane subunit | low | > 75 |
| Rhodospirillum rubrum S1H | 0.36 | Rru_A2913 | | Two component Transcriptional regulator, Winged helix family (NCBI) | 0.22 | Rru_A3237 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | low | > 58 |
| Vibrio cholerae E7946 ATCC 55056 | 0.36 | CSW01_15165 | | DNA-binding response regulator | 0.14 | CSW01_07065 | | multidrug resistance protein | low | > 62 |
| Bosea sp. OAE506 | 0.35 | ABIE41_RS01150 | | response regulator transcription factor | 0.23 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_009945 | | response regulator transcription factor | 0.18 | TX73_013300 | | efflux transporter outer membrane subunit | low | > 86 |
| Agrobacterium fabrum C58 | 0.33 | Atu0978 | | two component response regulator | 0.21 | Atu2552 | | nodulation protein T precursor | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.5008.1 | | Two-component system regulatory protein | 0.21 | Xcc-8004.3475.1 | | RND efflux system, outer membrane lipoprotein CmeC | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS18360 | | response regulator transcription factor | 0.23 | ABZR86_RS15395 | | efflux transporter outer membrane subunit | low | > 74 |
| Pantoea sp. MT58 | 0.27 | IAI47_00340 | | response regulator | 0.25 | IAI47_13160 | | efflux transporter outer membrane subunit | low | > 76 |
Not shown: 44 genomes with orthologs for BT0682 only; 12 genomes with orthologs for BT0884 only