Conservation of cofitness between b3292 and b3962 in Escherichia coli BW25113

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3292 zntR zinc-responsive transcriptional regulator (NCBI) 1.0 b3962 udhA putative oxidoreductase (VIMSS) 0.32 3
Escherichia coli ECRC62 1.00 BNILDI_02220 zntR Zn(2+)-responsive transcriptional regulator 1.00 BNILDI_05830 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli ECRC99 1.00 KEDOAH_10640 zntR Zn(2+)-responsive transcriptional regulator 1.00 KEDOAH_14600 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli ECOR38 1.00 HEPCGN_16330 zntR Zn(2+)-responsive transcriptional regulator 1.00 HEPCGN_12205 sthA Si-specific NAD(P)(+) transhydrogenase low > 85
Escherichia coli ECRC98 1.00 JDDGAC_21130 zntR Zn(2+)-responsive transcriptional regulator 1.00 JDDGAC_17185 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli ECRC101 1.00 MCAODC_08030 zntR Zn(2+)-responsive transcriptional regulator 1.00 MCAODC_04060 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli ECRC101 1.00 OKFHMN_17500 zntR Zn(2+)-responsive transcriptional regulator 1.00 OKFHMN_13560 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli ECRC102 1.00 NIAGMN_15270 zntR Zn(2+)-responsive transcriptional regulator 1.00 NIAGMN_11310 sthA Si-specific NAD(P)(+) transhydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00411 HTH-type transcriptional regulator ZntR 1.00 OHPLBJKB_04088 Soluble pyridine nucleotide transhydrogenase low > 73
Escherichia coli BL21 1.00 ECD_03143 zntA gene transcriptional activator 1.00 ECD_03847 pyridine nucleotide transhydrogenase, soluble low > 60
Escherichia coli ECOR27 1.00 NOLOHH_09300 zntR Zn(2+)-responsive transcriptional regulator 1.00 NOLOHH_05695 sthA Si-specific NAD(P)(+) transhydrogenase 0.61 51
Escherichia fergusonii Becca 0.99 EFB2_00531 HTH-type transcriptional regulator ZntR 1.00 EFB2_04650 Soluble pyridine nucleotide transhydrogenase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS18895 Zn(2+)-responsive transcriptional regulator 1.00 ECOLIN_RS22875 Si-specific NAD(P)(+) transhydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2387 transcriptional regulator, MerR family 0.93 GFF2348 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0035 Zn(II)-responsive transcriptional regulator 0.97 EX28DRAFT_4425 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS25700 heavy metal-responsive transcriptional regulator 0.95 BWI76_RS00870 NAD(P)(+) transhydrogenase
Enterobacter sp. TBS_079 0.88 MPMX20_04200 HTH-type transcriptional regulator ZntR 0.97 MPMX20_04518 Soluble pyridine nucleotide transhydrogenase low > 85
Erwinia tracheiphila SCR3 0.76 LU632_RS22515 zntR Zn(2+)-responsive transcriptional regulator 0.90 LU632_RS19585 sthA Si-specific NAD(P)(+) transhydrogenase low > 74
Serratia liquefaciens MT49 0.76 IAI46_23295 Zn(2+)-responsive transcriptional regulator 0.85 IAI46_24470 Si-specific NAD(P)(+) transhydrogenase low > 86
Pantoea sp. MT58 0.75 IAI47_02260 Zn(2+)-responsive transcriptional regulator 0.91 IAI47_00935 Si-specific NAD(P)(+) transhydrogenase low > 76
Rahnella sp. WP5 0.65 EX31_RS16005 Zn(2+)-responsive transcriptional regulator 0.85 EX31_RS14165 Si-specific NAD(P)(+) transhydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01430 Zn(2+)-responsive transcriptional regulator 0.77 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase low > 62
Phaeobacter inhibens DSM 17395 0.35 PGA1_262p00460 transcriptional regulator, MerR family 0.35 PGA1_c31610 putative soluble pyridine nucleotide transhydrogenase low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4838 transcriptional regulator, MerR family 0.62 Psyr_1901 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Pyridine nucleotide-disulfide oxidoreductase dimerization region
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4838 transcriptional regulator, MerR family 0.62 Psyr_1901 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Pyridine nucleotide-disulfide oxidoreductase dimerization region
Marinobacter adhaerens HP15 0.34 HP15_89 transcriptional regulator, MerR family protein 0.60 HP15_2245 soluble pyridine nucleotide transhydrogenase
Pseudomonas stutzeri RCH2 0.33 Psest_2758 Predicted transcriptional regulators 0.63 Psest_1663 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes low > 67
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28620 Cd(II)/Pb(II)-responsive transcriptional regulator 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28620 Cd(II)/Pb(II)-responsive transcriptional regulator 0.62 PFLU_RS07725 Si-specific NAD(P)(+) transhydrogenase low > 109
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_958 Cd(II)/Pb(II)-responsive transcriptional regulator 0.62 PfGW456L13_4024 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)
Rhizobium sp. OAE497 0.33 ABIE40_RS15545 helix-turn-helix domain-containing protein 0.36 ABIE40_RS08610 Si-specific NAD(P)(+) transhydrogenase low > 107
Alteromonas macleodii MIT1002 0.33 MIT1002_02061 Mercuric resistance operon regulatory protein 0.72 MIT1002_03373 Soluble pyridine nucleotide transhydrogenase low > 70
Pseudomonas putida KT2440 0.32 PP_5140 Transcriptional regulator, MerR family 0.62 PP_2151 soluble pyridine nucleotide transhydrogenase
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3947 Cd(II)/Pb(II)-responsive transcriptional regulator 0.61 Pf6N2E2_2274 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) low > 103
Pseudomonas simiae WCS417 0.32 PS417_26960 Cd(II)/Pb(II)-responsive transcriptional regulator 0.62 PS417_07650 pyridine nucleotide-disulfide oxidoreductase
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_10375 Cd(II)/Pb(II)-responsive transcriptional regulator 0.61 AO356_02250 pyridine nucleotide-disulfide oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08425 Cd(II)/Pb(II)-responsive transcriptional regulator 0.61 AO353_00390 pyridine nucleotide-disulfide oxidoreductase
Pseudomonas sp. RS175 0.32 PFR28_04825 Mercuric resistance operon regulatory protein 0.62 PFR28_01127 Soluble pyridine nucleotide transhydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2290 Cd(II)/Pb(II)-responsive transcriptional regulator 0.61 Pf1N1B4_3919 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1)
Agrobacterium fabrum C58 0.31 Atu0888 transcriptional regulator, MerR family 0.38 Atu1661 soluble pyridine nucleotide transhydrogenase low > 89
Dickeya dadantii 3937 0.31 DDA3937_RS02550 Cd(II)/Pb(II)-responsive transcriptional regulator 0.87 DDA3937_RS00975 Si-specific NAD(P)(+) transhydrogenase low > 74
Dickeya dianthicola ME23 0.30 DZA65_RS02685 Cd(II)/Pb(II)-responsive transcriptional regulator 0.87 DZA65_RS21445 Si-specific NAD(P)(+) transhydrogenase low > 75
Dickeya dianthicola 67-19 0.30 HGI48_RS02580 Cd(II)/Pb(II)-responsive transcriptional regulator 0.87 HGI48_RS20400 Si-specific NAD(P)(+) transhydrogenase low > 71
Mycobacterium tuberculosis H37Rv 0.24 Rv3334 Probable transcriptional regulatory protein (probably MerR-family) 0.40 Rv2713 Probable soluble pyridine nucleotide transhydrogenase SthA (STH) (NAD(P)(+) transhydrogenase [B-specific]) (nicotinamide nucleotide transhydrogenase) low > 58

Not shown: 15 genomes with orthologs for b3292 only; 4 genomes with orthologs for b3962 only