Conservation of cofitness between b1992 and b2807 in Escherichia coli BW25113

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1992 cobS cobalamin synthase (NCBI) 1.0 b2807 ygdD conserved inner membrane protein (NCBI) 0.17 13
Escherichia coli BL21 0.99 ECD_01901 cobalamin synthase 1.00 ECD_02658 UPF0382 family inner membrane protein low > 60
Escherichia coli ECRC62 0.99 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 BNILDI_10510 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECRC98 0.99 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 JDDGAC_23790 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECRC101 0.99 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 OKFHMN_20125 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECRC99 0.99 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 KEDOAH_08005 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECRC102 0.99 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 NIAGMN_17895 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECRC101 0.99 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 MCAODC_10650 ygdD UPF0382 inner membrane protein YgdD — —
Escherichia coli ECOR27 0.99 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 NOLOHH_12005 ygdD UPF0382 inner membrane protein YgdD low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase 1.00 OHPLBJKB_00924 hypothetical protein low > 73
Escherichia fergusonii Becca 0.98 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase 1.00 EFB2_01110 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase 1.00 ECOLIN_RS15645 DUF423 domain-containing protein low > 52
Escherichia coli ECOR38 0.98 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase 1.00 HEPCGN_19380 ygdD DUF423 domain-containing protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.93 GFF4864 COG2363 low > 78
Klebsiella michiganensis M5al 0.66 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.94 BWI76_RS22950 membrane protein — —
Rahnella sp. WP5 0.43 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase 0.76 EX31_RS13105 DUF423 domain-containing protein low > 89
Shewanella amazonensis SB2B 0.25 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) 0.28 Sama_2427 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.25 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.27 SO1535 conserved hypothetical protein (NCBI ptt file) low > 76
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS09775 cobalamin synthase 0.29 HSERO_RS06075 membrane protein low > 78
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_3760 Cobalamin-5-phosphate synthase 0.24 Echvi_2232 Uncharacterized small membrane protein low > 79
Shewanella loihica PV-4 0.23 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) 0.30 Shew_2762 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.23 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.27 Shewana3_2892 hypothetical protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase 0.22 CSW01_04595 DUF423 domain-containing protein low > 62
Pseudomonas sp. RS175 0.20 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.27 PFR28_04254 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_3672 cobalamin-5'-phosphate synthase 0.30 Psyr_4742 Protein of unknown function DUF423 low > 86
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_3672 cobalamin-5'-phosphate synthase 0.30 Psyr_4742 Protein of unknown function DUF423 — —
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_02595 cobalamin synthase 0.27 AO353_08225 hypothetical protein low > 101
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_4234 Cobalamin synthase 0.27 PfGW456L13_998 COG2363 low > 87
Pseudomonas simiae WCS417 0.17 PS417_20020 cobalamin synthase 0.30 PS417_26785 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.16 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.30 PFLU_RS28430 DUF423 domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.30 PFLU_RS28430 DUF423 domain-containing protein low > 109
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase 0.22 ABZR86_RS21295 DUF423 domain-containing protein low > 74
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_19180 cobalamin synthase 0.27 AO356_13365 hypothetical protein low > 104
Acinetobacter radioresistens SK82 0.13 MPMX26_01610 Adenosylcobinamide-GDP ribazoletransferase 0.22 MPMX26_01109 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_3715 Cobalamin synthase 0.27 Pf1N1B4_2329 COG2363 low > 87
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_5746 Cobalamin synthase 0.27 Pf6N2E2_4588 COG2363 low > 103
Pseudomonas sp. S08-1 0.12 OH686_04945 cobalamin 5'-phosphate synthase 0.32 OH686_14275 hypothetical regulator low > 80
Pseudomonas putida KT2440 0.12 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.32 PP_5106 conserved inner membrane protein low > 96

Not shown: 41 genomes with orthologs for b1992 only; 19 genomes with orthologs for b2807 only