| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2221 | atoD | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | 1.0 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | 0.29 | 2 |
| Escherichia coli BL21 | 1.00 | ECD_02148 | | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit | 1.00 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | 0.50 | 54 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01489 | | Acetate CoA-transferase subunit alpha | 1.00 | OHPLBJKB_01490 | | Regulatory protein AtoC | low | > 73 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS12970 | | acetate CoA-transferase subunit alpha | 1.00 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_22425 | atoD | acetate CoA-transferase subunit alpha | 1.00 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | low | > 85 |
| Escherichia fergusonii Becca | 0.99 | EFB2_01634 | | Acetate CoA-transferase subunit alpha | 1.00 | EFB2_01635 | | Regulatory protein AtoC | low | > 86 |
| Fusobacterium nucleatum SB010 | 0.59 | HUW76_01850 | | CoA transferase subunit A | 0.26 | HUW76_03635 | | sigma-54-dependent Fis family transcriptional regulator | low | > 35 |
| Azospirillum sp. SherDot2 | 0.55 | MPMX19_03462 | | Acetate CoA-transferase subunit alpha | 0.53 | MPMX19_03461 | | Regulatory protein AtoC | low | > 112 |
| Rhodospirillum rubrum S1H | 0.53 | Rru_A1472 | | Acetate CoA-transferase (NCBI) | 0.53 | Rru_A1385 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | low | > 58 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_04625 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.37 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | low | > 74 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS07905 | | CoA transferase subunit A | 0.39 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | low | > 80 |
| Caulobacter crescentus NA1000 Δfur | 0.43 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.37 | CCNA_03424 | | AAA-family response regulator tacA | low | > 67 |
| Pseudomonas putida KT2440 | 0.43 | PP_3951 | | 3-oxoadipate CoA-transferase subunit A | 0.37 | PP_4371 | | two component system AtoC DNA-binding transcriptional activator | low | > 96 |
| Caulobacter crescentus NA1000 | 0.43 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.37 | CCNA_03424 | | AAA-family response regulator tacA | low | > 66 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_021545 | | CoA transferase subunit A | 0.36 | TX73_021705 | | sigma-54 dependent transcriptional regulator | low | > 86 |
| Lysobacter sp. OAE881 | 0.43 | ABIE51_RS04380 | | CoA transferase subunit A | 0.36 | ABIE51_RS04850 | | sigma-54 dependent transcriptional regulator | low | > 62 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS06305 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.37 | CA265_RS01040 | | sigma-54-dependent Fis family transcriptional regulator | low | > 88 |
| Sphingomonas koreensis DSMZ 15582 | 0.42 | Ga0059261_0265 | | 3-oxoacid CoA-transferase, A subunit | 0.36 | Ga0059261_1363 | | PEP-CTERM-box response regulator transcription factor | low | > 68 |
| Kangiella aquimarina DSM 16071 | 0.42 | B158DRAFT_2505 | | 3-oxoacid CoA-transferase, A subunit | 0.33 | B158DRAFT_0521 | | PEP-CTERM-box response regulator transcription factor | low | > 40 |
| Ralstonia solanacearum UW163 | 0.41 | UW163_RS09800 | | 3-oxoadipate CoA-transferase subunit A | 0.39 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.41 | RALBFv3_RS03870 | | 3-oxoadipate CoA-transferase subunit A | 0.39 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS13360 | | 3-oxoadipate CoA-transferase subunit A | 0.39 | RPSI07_RS07835 | | sigma-54-dependent Fis family transcriptional regulator | low | > 81 |
| Agrobacterium fabrum C58 | 0.40 | Atu4547 | | 3-oxoadipate CoA-transferase subunit A | 0.35 | Atu3764 | | sigma 54 dependent transcriptional activator | low | > 89 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS10585 | | CoA transferase subunit A | 0.41 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS10585 | | CoA transferase subunit A | 0.41 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | low | > 109 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS15870 | | CoA transferase subunit A | 0.36 | ABZR88_RS12650 | | sigma-54 dependent transcriptional regulator | low | > 71 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.41 | PS417_05525 | | Fis family transcriptional regulator | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS02960 | | CoA transferase subunit A | 0.36 | A4249_RS09115 | | sigma-54 dependent transcriptional regulator | low | > 48 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | 0.37 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | 0.38 | Psest_0705 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.37 | AO356_15905 | | transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.39 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.40 | AO353_16225 | | Fis family transcriptional regulator | low | > 101 |
| Rhizobium sp. OAE497 | 0.38 | ABIE40_RS19560 | | 3-oxoacid CoA-transferase subunit A | 0.35 | ABIE40_RS16175 | | sigma-54 dependent transcriptional regulator | low | > 107 |
| Dinoroseobacter shibae DFL-12 | 0.38 | Dshi_1136 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.30 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.38 | PGA1_c06210 | | probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.31 | PGA1_c14810 | | nitrogen assimilation regulatory protein NtrX | — | — |
Not shown: 32 genomes with orthologs for b2221 only; 14 genomes with orthologs for b2220 only