Conservation of cofitness between b3752 and b2101 in Escherichia coli BW25113

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3752 rbsK ribokinase (NCBI) 1.0 b2101 yegW predicted DNA-binding transcriptional regulator (NCBI) 0.45 18
Escherichia coli ECRC101 1.00 MCAODC_05235 rbsK ribokinase 1.00 MCAODC_21075 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC102 1.00 NIAGMN_12485 rbsK ribokinase 1.00 NIAGMN_22030 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04301 Ribokinase 1.00 OHPLBJKB_01609 HTH-type transcriptional repressor YvoA low > 73
Escherichia coli ECRC99 1.00 KEDOAH_13420 rbsK ribokinase 1.00 KEDOAH_04065 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC101 1.00 OKFHMN_14730 rbsK ribokinase 1.00 OKFHMN_24085 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC98 1.00 JDDGAC_18350 rbsK ribokinase 1.00 JDDGAC_28195 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECOR27 1.00 NOLOHH_06865 rbsK ribokinase 1.00 NOLOHH_15425 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli ECRC62 1.00 BNILDI_04660 rbsK ribokinase 1.00 BNILDI_14340 yegW Uncharacterized HTH-type transcriptional regulator YegW — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21570 ribokinase 1.00 ECOLIN_RS12325 GntR family transcriptional regulator — —
Escherichia fergusonii Becca 1.00 EFB2_04881 Ribokinase 1.00 EFB2_01756 HTH-type transcriptional repressor NagR low > 86
Escherichia coli BL21 1.00 ECD_03638 ribokinase 1.00 ECD_02029 putative DNA-binding transcriptional regulator — —
Escherichia coli ECOR38 0.99 HEPCGN_13440 rbsK ribokinase 1.00 HEPCGN_02770 mngR GntR family transcriptional regulator low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF1705 Ribokinase (EC 2.7.1.15) 0.94 GFF3835 Uncharacterized HTH-type transcriptional regulator YegW low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_04615 Ribokinase 0.89 MPMX20_03075 HTH-type transcriptional repressor NagR 0.54 11
Klebsiella michiganensis M5al 0.80 BWI76_RS00290 Ribokinase (EC 2.7.1.15) (from data) 0.23 BWI76_RS01040 transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.77 EX28DRAFT_4028 ribokinase 0.89 EX28DRAFT_0470 Transcriptional regulators low > 76
Pectobacterium carotovorum WPP14 0.70 HER17_RS21530 ribokinase 0.84 HER17_RS16070 GntR family transcriptional regulator low > 75
Bacteroides ovatus ATCC 8483 0.43 BACOVA_02050 ribokinase 0.14 BACOVA_03251 UbiC transcription regulator-associated domain protein low > 94
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS20695 ribokinase 0.28 BPHYT_RS02725 GntR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.37 PFR28_02733 Ribokinase 0.25 PFR28_03511 HTH-type transcriptional repressor NagR low > 88
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS35905 ribokinase 0.27 QEN71_RS01580 GntR family transcriptional regulator low > 153
Pseudomonas simiae WCS417 0.34 PS417_18385 ribokinase 0.25 PS417_22980 GntR family transcriptional regulator — —
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2803 ribokinase (EC 2.7.1.15) (from data) 0.16 BT2103 transcriptional regulator (NCBI ptt file) low > 81
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20835 Ribokinase (EC 2.7.1.15) (from data) 0.26 AO353_04445 GntR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_00950 Ribokinase (EC 2.7.1.15) (from data) 0.25 AO356_17555 GntR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3908 Ribokinase (EC 2.7.1.15) 0.25 PfGW456L13_4829 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family low > 87
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05229 ribokinase 0.28 H281DRAFT_01980 transcriptional regulator, GntR family low > 103
Paraburkholderia graminis OAS925 0.32 ABIE53_002321 ribokinase 0.28 ABIE53_000688 GntR family transcriptional regulator low > 113
Azospirillum sp. SherDot2 0.32 MPMX19_02769 Ribokinase 0.25 MPMX19_03609 HTH-type transcriptional repressor NagR low > 112
Pseudomonas fluorescens SBW25 0.32 PFLU_RS20360 ribokinase 0.24 PFLU_RS24640 GntR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS20360 ribokinase 0.24 PFLU_RS24640 GntR family transcriptional regulator low > 109
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_15305 rbsK ribokinase 0.21 OKGIIK_14355 mngR GntR family transcriptional regulator low > 52
Agrobacterium fabrum C58 0.29 Atu4847 ribokinase 0.21 Atu2606 transcriptional regulator, GntR family low > 89
Lysobacter sp. OAE881 0.27 ABIE51_RS16435 ribokinase 0.22 ABIE51_RS01625 GntR family transcriptional regulator low > 62
Rhizobium sp. OAE497 0.27 ABIE40_RS01880 ribokinase 0.23 ABIE40_RS12115 GntR family transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.27 SMc01103 Ribokinase (EC 2.7.1.15) (from data) 0.21 SMc02876 transcriptional regulator — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.4302.1 Ribokinase (EC 2.7.1.15) 0.23 Xcc-8004.953.1 Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family low > 74
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01001 ribokinase 0.23 CCNA_00454 GntR-family transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.24 CCNA_01001 ribokinase 0.23 CCNA_00454 GntR-family transcriptional regulator low > 66
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_0568 Sugar kinases, ribokinase family 0.25 Ga0059261_1638 transcriptional regulator, GntR family — —
Phaeobacter inhibens DSM 17395 0.16 PGA1_c34980 putative pfkB family carbohydrate kinase 0.20 PGA1_c27900 ligand-binding UTRA domain-containing protein low > 62

Not shown: 40 genomes with orthologs for b3752 only; 1 genomes with orthologs for b2101 only