Conservation of cofitness between b2873 and b1190 in Escherichia coli BW25113

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2873 b2873 orf, hypothetical protein (VIMSS) 1.0 b1190 dadX alanine racemase (NCBI) 0.21 1
Escherichia coli BL21 1.00 ECD_02706 D-stereospecific phenylhydantoinase 1.00 ECD_01165 alanine racemase, catabolic, PLP-binding — —
Escherichia coli ECRC102 1.00 NIAGMN_17445 hyuA D-phenylhydantoinase 0.99 NIAGMN_27925 dadX catabolic alanine racemase DadX — —
Escherichia coli ECRC62 1.00 BNILDI_10130 hyuA D-phenylhydantoinase 0.99 BNILDI_18885 dadX catabolic alanine racemase DadX — —
Escherichia coli ECOR27 1.00 NOLOHH_11605 hyuA D-phenylhydantoinase 0.99 NOLOHH_20720 dadX catabolic alanine racemase DadX — —
Escherichia coli ECRC98 1.00 JDDGAC_23320 hyuA D-phenylhydantoinase 0.99 JDDGAC_06215 dadX catabolic alanine racemase DadX — —
Escherichia coli ECRC99 1.00 KEDOAH_08455 hyuA D-phenylhydantoinase 0.99 KEDOAH_25310 dadX catabolic alanine racemase DadX — —
Escherichia coli ECRC101 1.00 MCAODC_10200 hyuA D-phenylhydantoinase 0.99 MCAODC_21875 dadX catabolic alanine racemase DadX — —
Escherichia coli ECRC101 1.00 OKFHMN_19675 hyuA D-phenylhydantoinase 0.99 OKFHMN_28295 dadX catabolic alanine racemase DadX — —
Escherichia coli ECOR38 1.00 HEPCGN_18965 hyuA D-phenylhydantoinase 0.99 HEPCGN_24755 dadX catabolic alanine racemase DadX low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00842 D-phenylhydantoinase 1.00 OHPLBJKB_02499 Alanine racemase, catabolic low > 73
Escherichia coli Nissle 1917 0.98 ECOLIN_RS16015 D-phenylhydantoinase 0.98 ECOLIN_RS07190 catabolic alanine racemase DadX — —
Escherichia fergusonii Becca 0.98 EFB2_01028 D-phenylhydantoinase 0.99 EFB2_02742 Alanine racemase, catabolic low > 86
Klebsiella michiganensis M5al 0.79 BWI76_RS17515 dihydropyrimidinase 0.80 BWI76_RS17730 alanine racemase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF1643 Dihydropyrimidinase (EC 3.5.2.2) 0.49 GFF1915 Alanine racemase (EC 5.1.1.1) — —
Azospirillum sp. SherDot2 0.35 MPMX19_04685 D-hydantoinase 0.19 MPMX19_06140 Alanine racemase, biosynthetic — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS21105 phenylhydantoinase 0.58 BPHYT_RS12240 alanine racemase — —
Sinorhizobium meliloti 1021 0.34 SMc01821 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.21 SMc00557 alanine racemase low > 103
Variovorax sp. SCN45 0.34 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) 0.50 GFF5109 Alanine racemase (EC 5.1.1.1) — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS17980 dihydropyrimidinase 0.57 RPSI07_RS17275 alanine racemase — —
Rhizobium sp. OAE497 0.33 ABIE40_RS14535 dihydropyrimidinase 0.23 ABIE40_RS06295 alanine racemase low > 107
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_26570 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.45 AO353_09145 alanine racemase — —
Pseudomonas putida KT2440 0.33 PP_4036 D-hydantoinase/dihydropyrimidinase 0.44 PP_5269 alanine racemase, PLP-binding — —
Pseudomonas simiae WCS417 0.33 PS417_17320 phenylhydantoinase 0.45 PS417_27695 alanine racemase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS05405 dihydropyrimidinase 0.59 QEN71_RS06315 alanine racemase — —
Agrobacterium fabrum C58 0.32 Atu2386 dihydropyrimidinase 0.23 Atu1080 alanine racemase low > 89
Paraburkholderia graminis OAS925 0.32 ABIE53_002871 dihydropyrimidinase 0.60 ABIE53_002527 alanine racemase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS19250 dihydropyrimidinase 0.46 PFLU_RS29370 alanine racemase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS19250 dihydropyrimidinase 0.46 PFLU_RS29370 alanine racemase — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00381 dihydropyrimidinase 0.60 H281DRAFT_00589 alanine racemase — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_23095 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.44 AO356_12630 alanine racemase — —
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_3506 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.45 PfGW456L13_814 Alanine racemase (EC 5.1.1.1) — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4517 Dihydropyrimidinase (EC 3.5.2.2) 0.45 Pf1N1B4_2146 Alanine racemase (EC 5.1.1.1) — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_498 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.45 Pf6N2E2_4393 Alanine racemase (EC 5.1.1.1) — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS00365 dihydropyrimidinase 0.57 RR42_RS12035 alanine racemase — —
Acidovorax sp. GW101-3H11 0.31 Ac3H11_2956 Dihydropyrimidinase (EC 3.5.2.2) (from data) 0.50 Ac3H11_3382 Alanine racemase, catabolic (EC 5.1.1.1) — —
Bosea sp. OAE506 0.30 ABIE41_RS09740 dihydropyrimidinase 0.21 ABIE41_RS17795 alanine racemase low > 77
Castellaniella sp019104865 MT123 0.29 ABCV34_RS11005 dihydropyrimidinase 0.43 ABCV34_RS02335 alanine racemase — —
Methanococcus maripaludis S2 0.16 MMP_RS05220 dihydroorotase 0.26 MMP_RS07770 alanine racemase — —
Methanococcus maripaludis JJ 0.15 MMJJ_RS09160 dihydroorotase 0.26 MMJJ_RS06585 alanine racemase — —

Not shown: 3 genomes with orthologs for b2873 only; 24 genomes with orthologs for b1190 only