Conservation of cofitness between b0211 and b1097 in Escherichia coli BW25113

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) 1.0 b1097 yceG predicted aminodeoxychorismate lyase (NCBI) 0.35 11
Escherichia coli BL21 1.00 ECD_00204 putative membrane-bound lytic murein transglycosylase D 1.00 ECD_01093 septation protein, ampicillin sensitivity low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_03450 Membrane-bound lytic murein transglycosylase D 1.00 OHPLBJKB_02569 Endolytic murein transglycosylase low > 73
Escherichia coli ECRC62 0.90 BNILDI_09340 mltD murein transglycosylase D 1.00 BNILDI_19245 yceG cell division protein YceG — —
Escherichia coli ECOR27 0.90 NOLOHH_02330 mltD murein transglycosylase D 1.00 NOLOHH_21085 yceG cell division protein YceG low > 57
Escherichia fergusonii Becca 0.90 EFB2_03832 Membrane-bound lytic murein transglycosylase D 1.00 EFB2_02878 Endolytic murein transglycosylase low > 86
Escherichia coli ECOR38 0.90 HEPCGN_07925 mltD murein transglycosylase D 1.00 HEPCGN_23925 yceG cell division protein YceG 0.74 10
Escherichia coli ECRC99 0.90 KEDOAH_18170 mltD murein transglycosylase D 0.99 KEDOAH_24200 yceG cell division protein YceG — —
Escherichia coli ECRC102 0.90 NIAGMN_07835 mltD murein transglycosylase D 0.99 NIAGMN_24275 yceG cell division protein YceG — —
Escherichia coli ECRC98 0.90 JDDGAC_13580 mltD murein transglycosylase D 0.99 JDDGAC_07215 yceG cell division protein YceG — —
Escherichia coli ECRC101 0.90 MCAODC_00500 mltD murein transglycosylase D 0.99 MCAODC_22915 yceG cell division protein YceG — —
Escherichia coli ECRC101 0.90 OKFHMN_09985 mltD murein transglycosylase D 0.99 OKFHMN_03555 yceG cell division protein YceG — —
Enterobacter sp. TBS_079 0.88 MPMX20_00896 Membrane-bound lytic murein transglycosylase D 0.88 MPMX20_01777 Endolytic murein transglycosylase low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.87 EX28DRAFT_1832 conserved hypothetical protein, YceG family low > 76
Klebsiella michiganensis M5al 0.86 BWI76_RS05435 murein transglycosylase D 0.88 BWI76_RS11110 cell division protein YceG 0.33 11
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF4043 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.86 GFF3379 FIG004453: protein YceG like low > 78
Pantoea sp. MT58 0.68 IAI47_15345 murein transglycosylase D 0.64 IAI47_12050 cell division protein YceG 0.44 72
Erwinia tracheiphila SCR3 0.65 LU632_RS01075 mltD murein transglycosylase D 0.63 LU632_RS14800 yceG cell division protein YceG low > 74
Dickeya dadantii 3937 0.64 DDA3937_RS16065 murein transglycosylase D 0.56 DDA3937_RS23250 endolytic transglycosylase MltG low > 74
Pectobacterium carotovorum WPP14 0.64 HER17_RS05450 murein transglycosylase D 0.59 HER17_RS08670 endolytic transglycosylase MltG low > 75
Rahnella sp. WP5 0.64 EX31_RS21205 murein transglycosylase D 0.57 EX31_RS24455 endolytic transglycosylase MltG low > 89
Serratia liquefaciens MT49 0.63 IAI46_04130 murein transglycosylase D 0.56 IAI46_09810 endolytic transglycosylase MltG 0.69 13
Dickeya dianthicola 67-19 0.63 HGI48_RS16185 murein transglycosylase D 0.57 HGI48_RS13165 endolytic transglycosylase MltG low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS17270 murein transglycosylase D 0.56 DZA65_RS13635 endolytic transglycosylase MltG low > 75
Pseudomonas sp. RS175 0.34 PFR28_01551 Membrane-bound lytic murein transglycosylase D 0.30 PFR28_03006 Endolytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_24475 lytic transglycosylase 0.29 AO356_20185 aminodeoxychorismate lyase 0.59 19
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.30 PfGW456L13_2109 FIG004453: protein YceG like 0.71 5
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.30 Pf6N2E2_5956 FIG004453: protein YceG like 0.40 23
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.31 Psyr_1651 Protein of unknown function DUF175 0.39 43
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 0.31 Psyr_1651 Protein of unknown function DUF175 low > 86
Pseudomonas simiae WCS417 0.33 PS417_12215 lytic transglycosylase 0.31 PS417_21420 aminodeoxychorismate lyase 0.28 37
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.31 PFLU_RS23035 endolytic transglycosylase MltG low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.31 PFLU_RS23035 endolytic transglycosylase MltG low > 109
Alteromonas macleodii MIT1002 0.32 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor 0.33 MIT1002_01737 putative aminodeoxychorismate lyase low > 70
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_11400 lytic transglycosylase 0.40 CSW01_10075 endolytic transglycosylase MltG low > 62
Shewanella loihica PV-4 0.30 Shew_2115 lytic transglycosylase, catalytic (RefSeq) 0.33 Shew_1578 aminodeoxychorismate lyase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.30 Psest_2070 FOG: LysM repeat 0.34 Psest_1692 conserved hypothetical protein, YceG family low > 67
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_1060 FOG: LysM repeat 0.33 B158DRAFT_1749 conserved hypothetical protein, YceG family low > 40
Shewanella sp. ANA-3 0.29 Shewana3_2370 MltD domain-containing protein (RefSeq) 0.35 Shewana3_1765 aminodeoxychorismate lyase (RefSeq) — —
Shewanella oneidensis MR-1 0.29 SO2564 transglycosylase, Slt family (NCBI ptt file) 0.34 SO2614 conserved hypothetical protein TIGR00247 (NCBI ptt file) low > 76
Ralstonia sp. UNC404CL21Col 0.24 ABZR87_RS14160 transglycosylase SLT domain-containing protein 0.30 ABZR87_RS12480 endolytic transglycosylase MltG 0.57 10
Variovorax sp. SCN45 0.23 GFF1116 Membrane-bound lytic murein transglycosylase D 0.30 GFF30 Murein endolytic transglycosylase MltG low > 127
Variovorax sp. OAS795 0.22 ABID97_RS14725 transglycosylase SLT domain-containing protein 0.27 ABID97_RS15980 endolytic transglycosylase MltG 0.58 7
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_4079 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.17 Echvi_0372 conserved hypothetical protein, YceG family low > 79
Castellaniella sp019104865 MT123 0.18 ABCV34_RS10490 transglycosylase SLT domain-containing protein 0.28 ABCV34_RS03975 endolytic transglycosylase MltG low > 48
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS04425 lytic transglycosylase domain-containing protein 0.14 HMPREF1078_RS14735 endolytic transglycosylase MltG low > 61

Not shown: 6 genomes with orthologs for b0211 only; 33 genomes with orthologs for b1097 only