Conservation of cofitness between b1298 and b0223 in Escherichia coli BW25113

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1298 ycjL probable amidotransferase subunit (VIMSS) 1.0 b0223 yafJ predicted amidotransfease (NCBI) 0.18 18
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02384 Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD 1.00 OHPLBJKB_03416 Putative glutamine amidotransferase YafJ low > 73
Escherichia coli BL21 1.00 ECD_01275 gamma-glutamyl-gamma-aminobutyrate hydrolase 1.00 ECD_00218 type 2 glutamine amidotransferase family protein low > 60
Escherichia coli ECOR27 0.99 NOLOHH_20125 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 1.00 NOLOHH_02140 yafJ Putative glutamine amidotransferase YafJ — —
Escherichia coli ECRC102 0.99 NIAGMN_26610 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.99 NIAGMN_07630 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC101 0.99 OKFHMN_02440 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.99 OKFHMN_09770 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC101 0.99 MCAODC_15830 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.99 MCAODC_00290 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC99 0.98 KEDOAH_26335 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.99 KEDOAH_18385 yafJ class II glutamine amidotransferase — —
Escherichia coli ECRC62 0.98 BNILDI_18275 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 1.00 BNILDI_00335 yafJ Putative glutamine amidotransferase YafJ — —
Escherichia coli ECOR38 0.98 HEPCGN_25760 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 1.00 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ low > 85
Escherichia coli ECRC98 0.97 JDDGAC_04985 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase 0.99 JDDGAC_13395 yafJ class II glutamine amidotransferase — —
Klebsiella michiganensis M5al 0.90 BWI76_RS10705 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) 0.89 BWI76_RS05480 class II glutamine amidotransferase low > 92
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1499 Predicted glutamine amidotransferases 0.95 EX28DRAFT_2666 Predicted glutamine amidotransferase low > 76
Serratia liquefaciens MT49 0.77 IAI46_10555 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.86 IAI46_04345 class II glutamine amidotransferase low > 86
Rahnella sp. WP5 0.55 EX31_RS17900 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.86 EX31_RS21015 class II glutamine amidotransferase low > 89
Pantoea sp. MT58 0.53 IAI47_07120 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.86 IAI47_15185 class II glutamine amidotransferase low > 76
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2255 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) 0.59 Pf1N1B4_3359 Glutamine amidotransferase, class-II — —
Pseudomonas putida KT2440 0.38 PP_5298 putative glutamine amidotransferase 0.57 PP_4581 putative amidotransferase low > 96
Shewanella oneidensis MR-1 0.38 SO1267 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) 0.68 SO2535 hypothetical amidotransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_3099 peptidase C26 (RefSeq) 0.67 Shewana3_2322 glutamine amidotransferase, class-II (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_13140 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.59 AO356_04350 glutamine amidotransferase low > 104
Pseudomonas sp. S08-1 0.37 OH686_11480 Gamma-glutamyl-GABA hydrolase 0.59 OH686_05255 Putative glutamine amidotransferase YafJ low > 80
Pseudomonas stutzeri RCH2 0.37 Psest_4287 Predicted glutamine amidotransferases 0.55 Psest_1849 Predicted glutamine amidotransferase low > 67
Azospirillum brasilense Sp245 0.37 AZOBR_RS02010 glutamine amidotransferase 0.64 AZOBR_RS05605 glutamine amidotransferase low > 97
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS23165 glutamine amidotransferase 0.50 BPHYT_RS16680 glutamine amidotransferase — —
Shewanella loihica PV-4 0.36 Shew_0971 peptidase C26 (RefSeq) 0.67 Shew_2107 glutamine amidotransferase, class-II (RefSeq) — —
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4510 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.59 Pf6N2E2_2711 Glutamine amidotransferase, class-II low > 103
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS12930 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.53 QEN71_RS26860 class II glutamine amidotransferase 0.49 93
Shewanella amazonensis SB2B 0.35 Sama_2645 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.67 Sama_1869 amidotransferase (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_01080 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.52 H281DRAFT_04266 glutamine amidotransferase — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.58 Psyr_1576 Glutamine amidotransferase, class-II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase 0.58 Psyr_1576 Glutamine amidotransferase, class-II low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_29305 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) (from data) 0.59 AO353_17960 glutamine amidotransferase low > 101
Rhizobium sp. OAE497 0.31 ABIE40_RS16635 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein 0.10 ABIE40_RS01490 class II glutamine amidotransferase low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF2038 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) 0.50 GFF3024 Glutamine amidotransferase, class-II low > 90
Variovorax sp. OAS795 0.19 ABID97_RS02320 type 1 glutamine amidotransferase 0.52 ABID97_RS04635 class II glutamine amidotransferase low > 91
Variovorax sp. SCN45 0.19 GFF5374 Glutamine amidotransferase, class I 0.49 GFF6320 Putative glutamine amidotransferase YafJ low > 127

Not shown: 12 genomes with orthologs for b1298 only; 30 genomes with orthologs for b0223 only