Conservation of cofitness between b0004 and b0003 in Escherichia coli BW25113

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0004 thrC threonine synthase (NCBI) 1.0 b0003 thrB homoserine kinase (NCBI) 0.98 1
Escherichia coli ECOR27 1.00 NOLOHH_03430 thrC threonine synthase 1.00 NOLOHH_03435 thrB homoserine kinase low > 57
Escherichia coli ECRC62 1.00 BNILDI_08170 thrC threonine synthase 1.00 BNILDI_08165 thrB homoserine kinase — —
Escherichia coli ECRC98 1.00 JDDGAC_14695 thrC threonine synthase 1.00 JDDGAC_14700 thrB homoserine kinase — —
Escherichia coli ECRC99 1.00 KEDOAH_17055 thrC threonine synthase 1.00 KEDOAH_17050 thrB homoserine kinase — —
Escherichia coli ECRC101 1.00 OKFHMN_11100 thrC threonine synthase 1.00 OKFHMN_11105 thrB homoserine kinase — —
Escherichia coli ECRC102 1.00 NIAGMN_08950 thrC threonine synthase 1.00 NIAGMN_08955 thrB homoserine kinase — —
Escherichia coli BL21 1.00 ECD_00004 L-threonine synthase 1.00 ECD_00003 homoserine kinase 0.73 11
Escherichia coli ECRC101 1.00 MCAODC_01615 thrC threonine synthase 1.00 MCAODC_01620 thrB homoserine kinase — —
Escherichia fergusonii Becca 1.00 EFB2_04039 Threonine synthase 1.00 EFB2_04040 Homoserine kinase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03656 Threonine synthase 1.00 OHPLBJKB_03657 Homoserine kinase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_09105 thrC threonine synthase 1.00 HEPCGN_09110 thrB homoserine kinase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00020 threonine synthase 1.00 ECOLIN_RS00015 homoserine kinase low > 52
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3616 threonine synthase 0.91 EX28DRAFT_3615 homoserine kinase (EC 2.7.1.39) — —
Enterobacter sp. TBS_079 0.93 MPMX20_00712 Threonine synthase 0.91 MPMX20_00711 Homoserine kinase 0.98 1
Klebsiella michiganensis M5al 0.92 BWI76_RS04255 threonine synthase 0.89 BWI76_RS04250 homoserine kinase 0.95 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF1080 Threonine synthase (EC 4.2.3.1) 0.93 GFF1079 Homoserine kinase (EC 2.7.1.39) low > 78
Rahnella sp. WP5 0.85 EX31_RS03935 threonine synthase 0.81 EX31_RS03940 homoserine kinase 0.99 6
Serratia liquefaciens MT49 0.84 IAI46_03040 threonine synthase 0.80 IAI46_03035 homoserine kinase 0.88 6
Pantoea sp. MT58 0.81 IAI47_16205 threonine synthase 0.82 IAI47_16210 homoserine kinase 0.97 2
Dickeya dadantii 3937 0.80 DDA3937_RS18405 threonine synthase 0.81 DDA3937_RS18410 homoserine kinase 0.93 1
Dickeya dianthicola ME23 0.80 DZA65_RS19475 threonine synthase 0.81 DZA65_RS19480 homoserine kinase 0.72 5
Erwinia tracheiphila SCR3 0.79 LU632_RS02620 thrC threonine synthase 0.77 LU632_RS02615 thrB homoserine kinase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS18335 threonine synthase 0.81 HGI48_RS18340 homoserine kinase 0.74 5
Pectobacterium carotovorum WPP14 0.79 HER17_RS02805 threonine synthase 0.81 HER17_RS02800 homoserine kinase 0.92 25
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_11965 threonine synthase 0.72 CSW01_11970 homoserine kinase low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_03084 Threonine synthase 0.49 MIT1002_03085 Homoserine kinase 0.99 2
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.53 Shew_1080 homoserine kinase (RefSeq) 0.91 43
Shewanella sp. ANA-3 0.56 Shewana3_1141 threonine synthase (RefSeq) 0.51 Shewana3_1140 homoserine kinase (RefSeq) 0.97 1
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.52 SO3414 thrB homoserine kinase (NCBI ptt file) 0.99 1
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.52 Sama_0906 homoserine kinase (RefSeq) 0.99 1
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_2002 threonine synthase 0.22 Echvi_2001 homoserine kinase (EC 2.7.1.39) (from data) 0.97 2
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS18960 threonine synthase 0.23 ABZR88_RS18955 homoserine kinase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS23465 threonine synthase 0.22 CA265_RS23470 homoserine kinase (EC 2.7.1.39) (from data) 0.88 6
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.17 Xcc-8004.2956.1 Homoserine kinase (EC 2.7.1.39) 0.84 19
Lysobacter sp. OAE881 0.30 ABIE51_RS17530 threonine synthase 0.18 ABIE51_RS17525 homoserine kinase 0.94 34
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.18 LRK55_RS10000 homoserine kinase — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.19 LRK54_RS10360 homoserine kinase low > 59
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.15 ABZR86_RS15980 homoserine kinase (EC 2.7.1.39) (from data) 0.95 25
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_13570 thrC threonine synthase 0.18 OKGIIK_13565 thrB homoserine kinase low > 52

Not shown: 54 genomes with orthologs for b0004 only; 3 genomes with orthologs for b0003 only