Conservation of cofitness between Rru_A0306 and Rru_A1768 in Rhodospirillum rubrum S1H

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A0306 Hydrogenase formation HypD protein (NCBI) 1.0 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) 0.49 15
Dechlorosoma suillum PS 0.52 Dsui_1159 hydrogenase expression/formation protein HypD 0.33 Dsui_1969 protein-L-isoaspartate and D-aspartate O-methyltransferase low > 51
Variovorax sp. OAS795 0.51 ABID97_RS13610 hydrogenase formation protein HypD 0.27 ABID97_RS10720 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 91
Magnetospirillum magneticum AMB-1 0.51 AMB_RS08295 hydrogenase formation protein HypD 0.59 AMB_RS12670 protein-L-isoaspartate O-methyltransferase low > 64
Azospirillum sp. SherDot2 0.50 MPMX19_00716 Hydrogenase maturation factor HypD 0.55 MPMX19_01168 Protein-L-isoaspartate O-methyltransferase low > 112
Azospirillum brasilense Sp245 0.50 AZOBR_RS19860 hydrogenase formation protein HypD 0.59 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase — —
Rhodopseudomonas palustris CGA009 0.48 TX73_005030 hydrogenase formation protein HypD 0.37 TX73_014695 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Shewanella amazonensis SB2B 0.46 Sama_1671 hydrogenase expression/formation protein HypD (RefSeq) 0.39 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.45 Shewana3_1869 hydrogenase expression/formation protein HypD (RefSeq) 0.41 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.44 SO2091 hypD hydrogenase expression/formation protein HypD (NCBI ptt file) 0.40 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.44 IAI46_12560 hydrogenase formation protein HypD 0.43 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Shewanella loihica PV-4 0.44 Shew_1757 hydrogenase expression/formation protein HypD (RefSeq) 0.40 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 60
Dickeya dadantii 3937 0.44 DDA3937_RS14210 hydrogenase formation protein HypD 0.43 DDA3937_RS16885 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Dickeya dianthicola ME23 0.43 DZA65_RS14860 hydrogenase formation protein HypD 0.43 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 75
Rahnella sp. WP5 0.43 EX31_RS19880 hydrogenase formation protein HypD 0.45 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 89
Dickeya dianthicola 67-19 0.43 HGI48_RS14185 hydrogenase formation protein HypD 0.43 HGI48_RS16955 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2820 hydrogenase expression/formation protein HypD 0.41 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_03614 Hydrogenase maturation factor HypD 0.41 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Escherichia fergusonii Becca 0.41 EFB2_01194 Hydrogenase maturation factor HypD 0.41 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_01005 Hydrogenase maturation factor HypD 0.41 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 73
Escherichia coli ECRC101 0.41 MCAODC_11075 hypD hydrogenase formation protein HypD 0.41 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli ECOR27 0.41 NOLOHH_12395 hypD hydrogenase formation protein HypD 0.41 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli ECOR38 0.41 HEPCGN_19740 hypD hydrogenase formation protein HypD 0.41 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 87
Escherichia coli ECRC98 0.41 JDDGAC_24215 hypD hydrogenase formation protein HypD 0.41 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli BL21 0.41 ECD_02579 hydrogenase maturation protein 0.41 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II low > 61
Escherichia coli ECRC62 0.41 BNILDI_10945 hypD hydrogenase formation protein HypD 0.41 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase low > 75
Escherichia coli Nissle 1917 0.41 ECOLIN_RS15250 hydrogenase formation protein HypD 0.41 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase low > 55
Escherichia coli ECRC99 0.41 KEDOAH_07585 hypD hydrogenase formation protein HypD 0.41 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli BW25113 0.41 b2729 hypD protein required for maturation of hydrogenases (NCBI) 0.41 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS22360 hydrogenase formation protein HypD 0.42 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF4723 [NiFe] hydrogenase metallocenter assembly protein HypD 0.41 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 78
Escherichia coli ECRC102 0.40 NIAGMN_18320 hypD hydrogenase formation protein HypD 0.41 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECRC100 0.40 OKFHMN_20550 hypD hydrogenase formation protein HypD 0.41 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU0325 hypD hydrogenase expression/formation protein HypD (TIGR) 0.34 DVU1849 pcm protein-L-isoaspartate O-methyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2276 hydrogenase formation HypD protein (RefSeq) 0.34 DvMF_0412 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 51
Methanococcus maripaludis S2 0.36 MMP_RS01555 hydrogenase formation protein HypD 0.31 MMP_RS00570 protein-L-isoaspartate O-methyltransferase — —
Methanococcus maripaludis JJ 0.36 MMJJ_RS03820 hydrogenase formation protein HypD 0.31 MMJJ_RS04915 protein-L-isoaspartate O-methyltransferase low > 28
Alteromonas macleodii MIT1002 0.28 MIT1002_00280 Hydrogenase isoenzymes formation protein HypD 0.38 MIT1002_00628 Protein-L-isoaspartate O-methyltransferase low > 70

Not shown: 2 genomes with orthologs for Rru_A0306 only; 41 genomes with orthologs for Rru_A1768 only