| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2832 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 100 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2832 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | insig. | 100 | 100 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2846 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | sig. | 99 | 100 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2846 | | Phage integrase:Phage integrase, N-terminal SAM-like protein | sig. | 99 | 100 |
| | Pseudomonas sp. DMC3 | GFF3642 | | Tyrosine recombinase XerC | insig. | 76 | 82 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_08945 | | Integrase | insig. | 60 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_27450 | | integrase | insig. | 42 | 96 |
| o | Pseudomonas sp. SVBP6 | COO64_RS24090 | | tyrosine-type recombinase/integrase | insig. | 42 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | NPBIFN_02481 | | Integrase | insig. | 44 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2757 | | Integrase | insig. | 42 | 97 |
| o | Pseudomonas putida KT2440 | PP_3987 | | Site-specific recombinase, phage integrase family | insig. | 43 | 90 |
| o | Pseudomonas aeruginosa MRSN321 | PFGADD_02418 | | Integrase family protein | sig. | 41 | 93 |
| | Pseudomonas protegens RBAN4 | FABNJH_19545 | | Putative site-specific recombinase, integrase family | insig. | 39 | 94 |
| | Pseudomonas putida KT2440 | PP_3920 | | putative Phage integrase | insig. | 39 | 96 |
| | Pseudomonas protegens RBAN4 | FABNJH_17755 | | Core-binding (CB) domain-containing protein | insig. | 42 | 60 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2888 | | Mobile element protein | sig. | 83 | 22 |
| | Pseudomonas segetis P6 | ACVTMO_RS16945 | | tyrosine-type recombinase/integrase | insig. | 30 | 94 |
| | Escherichia coli ECOR38 | HEPCGN_03620 | xerD | integrase | insig. | 30 | 81 |
| | Escherichia coli ECRC101 | MCAODC_20170 | xerD | integrase | insig. | 30 | 80 |
| | Escherichia coli ECRC100 | OKFHMN_25220 | xerD | integrase | insig. | 29 | 81 |
| | Escherichia coli ECRC102 | NIAGMN_22725 | xerD | integrase | cofit | 29 | 81 |
| | Escherichia coli ECRC98 | JDDGAC_29350 | xerD | integrase | insig. | 29 | 81 |
| | Escherichia coli ECRC99 | KEDOAH_02875 | xerD | integrase | no data | 29 | 81 |
| | Shewanella loihica PV-4 | Shew_0995 | | phage integrase family protein (RefSeq) | insig. | 30 | 92 |
| | Dickeya dianthicola 67-19 | HGI48_RS08260 | | tyrosine-type recombinase/integrase | insig. | 29 | 64 |
| | Escherichia coli ECRC100 | OKFHMN_05160 | | integrase | insig. | 29 | 82 |
| | Escherichia coli ECRC102 | NIAGMN_02880 | | integrase | cofit | 29 | 82 |
| | Escherichia coli ECRC99 | KEDOAH_22575 | | integrase | no data | 29 | 82 |
| | Escherichia coli ECRC98 | JDDGAC_08770 | | integrase | insig. | 29 | 82 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_27150 | | hypothetical protein | insig. | 42 | 31 |
| | Escherichia coli ECRC101 | MCAODC_24550 | | Integrase from prophage | insig. | 30 | 54 |
| | Variovorax sp. OAS795 | ABID97_RS15035 | | tyrosine-type recombinase/integrase | insig. | 28 | 71 |
| | Escherichia coli ECRC100 | OKFHMN_06645 | int | Integrase | cofit | 29 | 65 |
| | Escherichia coli ECRC101 | MCAODC_25865 | int | Integrase | insig. | 29 | 65 |
| | Escherichia coli ECRC102 | NIAGMN_04695 | int | Integrase | cofit | 29 | 65 |
| | Escherichia coli ECRC98 | JDDGAC_10300 | int | Integrase | insig. | 29 | 65 |
| | Escherichia coli ECRC99 | KEDOAH_21320 | int | Integrase | no data | 29 | 65 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24420 | | integrase | insig. | 30 | 61 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS06645 | | hypothetical protein | insig. | 30 | 41 |
| | Escherichia coli ECOR27 | NOLOHH_23070 | int | Integrase | cofit | 28 | 65 |
| | Pseudomonas sp. RS175 | PFR28_02716 | | hypothetical protein | insig. | 30 | 58 |
| | Pantoea sp. MT58 | IAI47_18400 | | tyrosine recombinase XerC | sig. | 27 | 72 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS18660 | xerC | tyrosine recombinase XerC | no data | 27 | 72 |
| | Shewanella oneidensis MR-1 | SO_A0045 | | site-specific recombinase, phage integrase family (NCBI) | insig. | 25 | 76 |
| | Escherichia coli ECRC100 | OKFHMN_02750 | | Tyr recombinase domain-containing protein | insig. | 28 | 47 |
| | Escherichia coli ECRC102 | NIAGMN_27220 | | Tyr recombinase domain-containing protein | insig. | 28 | 47 |
| | Escherichia coli ECRC98 | JDDGAC_05285 | | Tyr recombinase domain-containing protein | insig. | 28 | 47 |
| | Escherichia coli ECRC99 | KEDOAH_26000 | | Tyr recombinase domain-containing protein | no data | 28 | 47 |
| | Pectobacterium carotovorum WPP14 | HER17_RS01350 | | tyrosine recombinase XerC | strong | 25 | 72 |
| | Serratia liquefaciens MT49 | IAI46_00725 | | tyrosine recombinase XerC | insig. | 25 | 72 |
| | Shewanella oneidensis MR-1 | SOA0044 | | site-specific recombinase, phage integrase family (NCBI ptt file) | insig. | 24 | 77 |
| | Azospirillum brasilense Sp245 | AZOBR_RS15305 | | putative phage integrase | insig. | 27 | 91 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01440 | | tyrosine-type recombinase/integrase | insig. | 27 | 64 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01050 | | site-specific recombinase, phage integrase family/ribosomal subunit interface protein | insig. | 23 | 69 |
| | Dechlorosoma suillum PS | Dsui_0651 | | tyrosine recombinase XerC | insig. | 27 | 72 |
| | Dickeya dadantii 3937 | DDA3937_RS19890 | | tyrosine recombinase XerC | no data | 26 | 72 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03171 | | hypothetical protein | insig. | 34 | 22 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS16135 | | site-specific integrase | insig. | 26 | 40 |
| | Shewanella loihica PV-4 | Shew_0325 | | tyrosine recombinase XerC (RefSeq) | sig. | 26 | 41 |
| | Erwinia amylovora T8 | OLJFJH_06415 | | tyrosine recombinase XerC | strong | 24 | 72 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1617 | | Mobile element protein | insig. | 29 | 42 |
| | Dickeya dianthicola 67-19 | HGI48_RS20045 | | tyrosine recombinase XerC | strong | 26 | 72 |
| | Dickeya dianthicola ME23 | DZA65_RS21090 | | tyrosine recombinase XerC | insig. | 26 | 72 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c25840 | | phase integrase-like protein | insig. | 21 | 86 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09795 | | integrase | insig. | 27 | 58 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09715 | | hypothetical protein | insig. | 27 | 38 |
| | Rahnella sp. WP5 | EX31_RS17115 | | tyrosine-type recombinase/integrase | insig. | 25 | 65 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c30760 | | putative phage integrase | insig. | 28 | 44 |
| | Escherichia coli ECOR38 | HEPCGN_25165 | | integrase | insig. | 28 | 43 |
| | Escherichia coli ECRC100 | OKFHMN_28700 | | integrase | no data | 28 | 43 |
| | Escherichia coli ECRC101 | MCAODC_21560 | | integrase | strong | 28 | 43 |
| | Escherichia coli ECRC102 | NIAGMN_27160 | | integrase | no data | 28 | 43 |
| | Escherichia coli ECRC102 | NIAGMN_27535 | | integrase | no data | 28 | 43 |
| | Escherichia coli ECRC99 | KEDOAH_25695 | | integrase | no data | 28 | 43 |
| | Erwinia tracheiphila SCR3 | LU632_RS24135 | xerC | tyrosine recombinase XerC | no data | 23 | 72 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01655 | | tyrosine recombinase XerC | no data | 27 | 69 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_08780 | xerC | tyrosine recombinase XerC | no data | 23 | 72 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0988 | | integrase family protein (RefSeq) | cofit | 26 | 65 |
| | Escherichia coli ECRC98 | JDDGAC_05875 | | integrase | insig. | 27 | 43 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2742 | | integrase, site-specific recombinase (NCBI ptt file) | insig. | 24 | 69 |
| | Escherichia fergusonii Becca | EFB2_02106 | | hypothetical protein | insig. | 26 | 65 |
| | Escherichia coli BL21 | ECD_03687 | | site-specific tyrosine recombinase | sig. | 25 | 51 |
| | Escherichia fergusonii Becca | EFB2_04826 | | Tyrosine recombinase XerC | strong | 25 | 51 |
| | Escherichia coli ECOR27 | NOLOHH_06550 | xerC | tyrosine recombinase XerC | sig. | 25 | 51 |
| | Escherichia coli ECOR38 | HEPCGN_13125 | xerC | tyrosine recombinase XerC | cofit | 25 | 51 |
| | Escherichia coli ECRC62 | BNILDI_04985 | xerC | tyrosine recombinase XerC | insig. | 25 | 51 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04239 | | Tyrosine recombinase XerC | insig. | 25 | 51 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS21875 | | tyrosine recombinase XerC | strong | 25 | 51 |
| | Escherichia coli BW25113 | b3811 | xerC | site-specific tyrosine recombinase XerC (NCBI) | strong | 25 | 51 |
| | Agrobacterium fabrum C58 | Atu0438 | | phage-related integrase | sig. | 26 | 43 |