Homologs of GFF5 from Sphingobium sp. HT1-2

DNA-binding protein
KEGG: putative transcriptional regulator

50 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5 DNA-binding protein strong 100 100
  Agrobacterium fabrum C58 Atu1735 hypothetical protein insig. 47 63
  Sphingobium sp. HT1-2 GFF5385 hypothetical protein cofit 73 48
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2249 Putative merR family bacterial regulatory protein cofit 36 89
o Escherichia coli ECOR27 NOLOHH_06115 transcriptional regulator insig. 32 95
o Escherichia coli ECRC62 BNILDI_05415 transcriptional regulator insig. 32 95
o Escherichia coli Nissle 1917 ECOLIN_RS22415 NadS family protein insig. 32 95
  Phaeobacter inhibens DSM 17395 PGA1_c11010 Predicted transcriptional regulator no data 43 61
o Rhodospirillum rubrum S1H Rru_A0304 Transcriptional Regulator, XRE family (NCBI) no data 38 85
o Pseudomonas fluorescens FW300-N2C3 AO356_01875 Cro/Cl family transcriptional regulator insig. 36 84
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2244 Putative merR family bacterial regulatory protein no data 35 84
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02150 helix-turn-helix domain-containing protein no data 35 84
o Pseudomonas putida KT2440 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) strong 35 89
  Pseudomonas sp. DMC3 GFF4174 hypothetical protein cofit 42 66
o Azospirillum brasilense Sp245 AZOBR_RS33275 hypothetical protein no data 40 86
  Rhodospirillum rubrum S1H Rru_A3065 Transcriptional Regulator, XRE family (NCBI) insig. 33 85
  Pseudomonas sp. BP01 JOY50_RS25360 DNA-binding transcriptional regulator no data 37 74
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07755 helix-turn-helix domain-containing protein no data 31 86
  Erwinia tracheiphila SCR3 LU632_RS25495 type II toxin-antitoxin system MqsA family antitoxin sig. 30 86
  Bosea sp. OAE506 ABIE41_RS21935 helix-turn-helix domain-containing protein no data 41 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00897 hypothetical protein cofit 36 78
  Rhodopseudomonas palustris CGA009 TX73_016350 helix-turn-helix domain-containing protein insig. 38 59
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_27555 transcriptional regulator no data 35 81
  Escherichia coli ECOR38 HEPCGN_15855 yiaG transcriptional regulator insig. 31 86
  Escherichia coli Nissle 1917 ECOLIN_RS19445 NadS family protein insig. 31 86
  Pseudomonas fluorescens SBW25 PFLU_RS18685 XRE family transcriptional regulator insig. 31 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18685 XRE family transcriptional regulator insig. 31 92
  Pseudomonas simiae WCS417 PS417_16645 XRE family transcriptional regulator insig. 31 92
  Klebsiella michiganensis M5al BWI76_RS13595 transcriptional regulator sig. 34 76
  Serratia liquefaciens MT49 IAI46_21160 helix-turn-helix domain-containing protein insig. 38 57
  Erwinia amylovora T8 OLJFJH_00320 transcriptional regulator no data 39 57
  Erwinia amylovora T8 OLJFJH_00370 transcriptional regulator no data 39 57
  Erwinia amylovora T8 OLJFJH_00420 transcriptional regulator no data 39 57
  Erwinia amylovora T8 OLJFJH_18705 transcriptional regulator no data 39 57
  Erwinia amylovora T8 OLJFJH_18755 transcriptional regulator no data 39 57
  Castellaniella sp019104865 MT123 ABCV34_RS14660 helix-turn-helix domain-containing protein insig. 36 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_391 Helix-turn-helix motif no data 34 77
  Klebsiella pneumoniae MRSN742743 KFA93_RS14415 nadS;inference=COORDINATES NadS family protein no data 33 76
  Rhodospirillum rubrum S1H Rru_A2941 putative DNA-binding protein (NCBI) cofit 35 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09740 helix-turn-helix domain-containing protein cofit 35 81
  Pseudomonas fluorescens FW300-N2C3 AO356_16990 XRE family transcriptional regulator insig. 28 91
  Shewanella oneidensis MR-1 SOA0068 conserved hypothetical protein (NCBI ptt file) no data 40 57
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12470 helix-turn-helix domain-containing protein insig. 31 81
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22805 transcriptional regulator sig. 30 94
  Ralstonia solanacearum UW163 UW163_RS23425 transcriptional regulator insig. 30 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5322 Predicted transcriptional regulator insig. 27 91
  Escherichia fergusonii Becca EFB2_04054 hypothetical protein cofit 36 57
  Escherichia coli ECOR38 HEPCGN_09185 transcriptional regulator insig. 36 57
  Rhodospirillum rubrum S1H Rru_A0921 DNA-binding protein (NCBI) no data 43 49
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4152 FIG050068: DNA-binding protein insig. 41 49