Homologs of Echvi_2176 from Echinicola vietnamensis KMM 6221, DSM 17526

RNA polymerase sigma factor, sigma-70 family

93 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2176 RNA polymerase sigma factor, sigma-70 family insig. 100 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0837 RNA polymerase sigma factor, sigma-70 family insig. 38 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3782 RNA polymerase sigma factor, sigma-70 family insig. 34 87
  Bacteroides ovatus ATCC 8483 BACOVA_03337 RNA polymerase sigma factor, sigma-70 family insig. 31 81
  Bacteroides thetaiotaomicron VPI-5482 BT3517 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2655 RNA polymerase sigma factor, sigma-70 family insig. 33 84
  Bacteroides ovatus ATCC 8483 BACOVA_04457 RNA polymerase sigma factor, sigma-70 family insig. 37 79
  Bacteroides thetaiotaomicron VPI-5482 BT4636 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 31 83
  Bacteroides thetaiotaomicron VPI-5482 BT1728 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 32 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2161 RNA polymerase sigma factor, sigma-70 family insig. 34 79
  Bacteroides ovatus ATCC 8483 BACOVA_00436 sigma-70, region 4 insig. 31 79
  Cellulophaga baltica 18 M666_RS04730 sigma-70 family RNA polymerase sigma factor insig. 30 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11885 sigma-70 family RNA polymerase sigma factor strong 29 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3996 RNA polymerase sigma factor, sigma-70 family insig. 28 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1322 RNA polymerase sigma factor, sigma-70 family sig. 31 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09115 hypothetical protein strong 30 80
  Bacteroides ovatus ATCC 8483 BACOVA_00784 Sigma-70 region 2 insig. 29 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11845 hypothetical protein insig. 31 82
  Bacteroides ovatus ATCC 8483 BACOVA_01604 Sigma-70 region 2 insig. 29 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02650 RNA polymerase sigma factor insig. 25 86
  Phocaeicola dorei CL03T12C01 ABI39_RS21180 sigma-70 family RNA polymerase sigma factor insig. 26 87
  Phocaeicola dorei CL03T12C01 ABI39_RS18115 RNA polymerase sigma-70 factor insig. 28 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03970 hypothetical protein insig. 29 69
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15130 RNA polymerase sigma factor insig. 31 84
  Phocaeicola dorei CL03T12C01 ABI39_RS14645 sigma-70 family RNA polymerase sigma factor strong 27 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12555 sigma-70 family RNA polymerase sigma factor insig. 30 73
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18335 sigma-70 family RNA polymerase sigma factor strong 27 80
  Bacteroides thetaiotaomicron VPI-5482 BT0978 ECF-type sigma factor (NCBI ptt file) sig. 27 75
  Bacteroides ovatus ATCC 8483 BACOVA_00619 RNA polymerase sigma factor, sigma-70 family insig. 30 75
  Bacteroides ovatus ATCC 8483 BACOVA_05174 RNA polymerase sigma-70 factor insig. 28 76
  Cellulophaga baltica 18 M666_RS17335 sigma-70 family RNA polymerase sigma factor insig. 25 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13615 RNA polymerase sigma factor insig. 27 81
  Phocaeicola dorei CL03T12C01 ABI39_RS08655 RNA polymerase sigma-70 factor insig. 24 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13420 RNA polymerase sigma-70 factor insig. 24 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2852 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 strong 27 74
  Phocaeicola dorei CL03T12C01 ABI39_RS06310 RNA polymerase sigma-70 factor cofit 25 84
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 26 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13125 RNA polymerase subunit sigma-70 strong 23 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04080 RNA polymerase sigma-70 factor insig. 31 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11705 hypothetical protein insig. 32 73
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 26 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00590 RNA polymerase sigma-70 factor insig. 26 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12535 RNA polymerase insig. 28 72
  Bacteroides ovatus ATCC 8483 BACOVA_01977 RNA polymerase sigma-70 factor cofit 25 85
  Bacteroides ovatus ATCC 8483 BACOVA_01132 sigma-70, region 4 insig. 24 79
  Dinoroseobacter shibae DFL-12 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 66
  Bacteroides thetaiotaomicron VPI-5482 BT1877 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10785 RNA polymerase sigma-70 factor sig. 25 84
  Phocaeicola dorei CL03T12C01 ABI39_RS10885 sigma-70 family RNA polymerase sigma factor insig. 33 41
  Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 24 77
  Phocaeicola dorei CL03T12C01 ABI39_RS00860 RNA polymerase sigma-70 factor insig. 23 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24675 RNA polymerase insig. 23 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12920 RNA polymerase sigma-70 factor cofit 26 68
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 25 88
  Synechococcus elongatus PCC 7942 Synpcc7942_2004 sigI RNA polymerase sigma factor insig. 26 70
  Bacteroides thetaiotaomicron VPI-5482 BT4355 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 24 78
  Bacteroides stercoris CC31F HMPREF1181_RS10020 RNA polymerase sigma-70 factor cofit 28 73
  Cupriavidus basilensis FW507-4G11 RR42_RS05730 DNA-directed RNA polymerase sigma-70 factor insig. 27 81
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 23 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 23 81
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 23 81
  Bacteroides ovatus ATCC 8483 BACOVA_02951 RNA polymerase sigma-70 factor insig. 28 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 23 81
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06675 hypothetical protein insig. 29 72
  Bacteroides ovatus ATCC 8483 BACOVA_03594 RNA polymerase sigma-70 factor insig. 27 41
  Phocaeicola dorei CL03T12C01 ABI39_RS10300 RNA polymerase sigma-70 factor sig. 30 85
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 20 86
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3485 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 26 61
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02390 RNA polymerase sigma-70 factor sig. 24 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12340 RNA polymerase sigma-70 factor cofit 23 79
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 27 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0453 RNA polymerase sigma factor, sigma-70 family insig. 25 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4205 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 23 68
  Bacteroides ovatus ATCC 8483 BACOVA_02037 RNA polymerase sigma-70 factor insig. 34 45
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3981 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 24 81
  Phaeobacter inhibens DSM 17395 PGA1_c27510 'RNA polymerase sigma factor (sigma-70 family; ECF11 subgroup)' insig. 24 59
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13360 RNA polymerase sigma-70 factor insig. 26 40
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 26 72
  Phocaeicola dorei CL03T12C01 ABI39_RS01635 RNA polymerase sigma-70 factor insig. 24 82
  Bacteroides ovatus ATCC 8483 BACOVA_02944 RNA polymerase sigma-70 factor insig. 23 82
  Bacteroides thetaiotaomicron VPI-5482 BT2198 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 28 64
  Pseudomonas aeruginosa MRSN321 DY961_RS02510 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 27 64
  Pseudomonas aeruginosa PA14 IKLFDK_14715 ECF family RNA polymerase sigma factor SbrI insig. 27 64
  Pseudomonas aeruginosa PUPa3 DQ20_RS33080 sbrI;inference=COORDINATES ECF family RNA polymerase sigma factor SbrI insig. 27 64
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08105 RNA polymerase sigma factor insig. 25 80
  Cellulophaga baltica 18 M666_RS04180 RNA polymerase sigma factor insig. 32 66
  Bacteroides thetaiotaomicron VPI-5482 BT4643 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 67
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 26 70
  Phocaeicola dorei CL03T12C01 ABI39_RS10065 sigma-70 family RNA polymerase sigma factor insig. 25 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 22 87
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 24 62
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 23 75
  Shewanella amazonensis SB2B Sama_2611 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 23 75