Homologs of SO3013 from Shewanella oneidensis MR-1

site-specific recombinase, phage integrase family (NCBI ptt file)
SEED: phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3013 site-specific recombinase, phage integrase family (NCBI ptt file) strong 100 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2112 Phage integrase insig. 40 97
o Serratia liquefaciens MT49 IAI46_15305 integrase arm-type DNA-binding domain-containing protein insig. 39 99
  Serratia liquefaciens MT49 IAI46_13845 tyrosine-type recombinase/integrase insig. 39 96
  Klebsiella michiganensis M5al BWI76_RS12025 integrase insig. 31 96
o Escherichia coli ECRC101 MCAODC_13060 integrase cofit 29 95
  Escherichia coli ECRC62 BNILDI_08820 integrase cofit 31 100
  Escherichia coli ECOR38 HEPCGN_24090 integrase insig. 30 100
  Escherichia coli ECRC102 NIAGMN_24765 integrase insig. 30 100
  Escherichia coli ECRC100 OKFHMN_00640 integrase cofit 30 100
  Escherichia coli ECRC101 MCAODC_22445 integrase insig. 30 100
  Escherichia coli ECRC98 JDDGAC_06725 integrase cofit 30 100
  Escherichia coli ECRC99 KEDOAH_24725 integrase no data 30 100
  Escherichia coli ECOR38 HEPCGN_00365 integrase insig. 29 94
  Dickeya dadantii 3937 DDA3937_RS01320 site-specific integrase insig. 28 95
  Escherichia coli ECRC100 OKFHMN_24570 Integrase cofit 32 72
  Escherichia coli ECRC98 JDDGAC_28680 Integrase insig. 32 72
  Escherichia coli ECRC99 KEDOAH_03580 Integrase no data 32 72
o Vibrio cholerae E7946 ATCC 55056 CSW01_15355 integrase insig. 29 91
  Shewanella oneidensis MR-1 SO0388 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 28 93
  Rahnella sp. WP5 EX31_RS14515 site-specific integrase insig. 26 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3250 Integrase insig. 27 87
  Dickeya dianthicola 67-19 HGI48_RS14775 tyrosine-type recombinase/integrase insig. 27 92
  Pseudomonas fluorescens SBW25 PFLU_RS09280 DUF4102 domain-containing protein insig. 28 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09280 DUF4102 domain-containing protein insig. 28 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3387 Phage integrase insig. 28 95
  Serratia liquefaciens MT49 IAI46_05415 tyrosine-type recombinase/integrase insig. 28 92
  Escherichia coli Nissle 1917 ECOLIN_RS11360 integrase arm-type DNA-binding domain-containing protein no data 27 74
  Erwinia tracheiphila SCR3 LU632_RS20815 tyrosine-type recombinase/integrase insig. 26 74
  Escherichia coli ECOR38 HEPCGN_03600 integrase cofit 26 71
  Erwinia amylovora T8 OLJFJH_17590 integrase insig. 26 89
  Enterobacter sp. TBS_079 MPMX20_00413 Prophage integrase IntS insig. 26 95
  Dickeya dianthicola ME23 DZA65_RS02080 tyrosine-type recombinase/integrase insig. 27 95
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 25 96
  Dickeya dianthicola ME23 DZA65_RS07740 integrase arm-type DNA-binding domain-containing protein insig. 28 74
  Pseudomonas fluorescens FW300-N2C3 AO356_00335 integrase insig. 27 95
  Escherichia fergusonii Becca EFB2_00168 Prophage integrase IntA insig. 25 99
  Escherichia coli ECOR38 HEPCGN_10690 integrase insig. 30 74
  Pseudomonas fluorescens SBW25 PFLU_RS24915 tyrosine-type recombinase/integrase insig. 28 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24915 tyrosine-type recombinase/integrase insig. 28 89
  Escherichia coli ECOR38 HEPCGN_18430 integrase insig. 27 95
  Escherichia coli Nissle 1917 ECOLIN_RS16505 integrase arm-type DNA-binding domain-containing protein insig. 27 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1289.1 Integrase insig. 25 92
  Escherichia fergusonii Becca EFB2_00934 Prophage integrase IntS no data 27 95
  Escherichia fergusonii Becca EFB2_04402 Prophage integrase IntS no data 27 95
  Pseudomonas sp. DMC3 GFF4361 Prophage integrase IntA cofit 27 93
  Enterobacter sp. TBS_079 MPMX20_00561 Prophage integrase IntA insig. 28 74
  Rahnella sp. WP5 EX31_RS04360 integrase arm-type DNA-binding domain-containing protein insig. 27 74
  Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 26 92
  Escherichia coli ECRC100 OKFHMN_09385 fimB integrase insig. 25 92
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 25 92
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase cofit 25 92
  Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 25 88
  Pseudomonas sp. DMC3 GFF4956 Prophage integrase IntA insig. 28 95
  Ralstonia solanacearum GMI1000 RS_RS04790 DUF4102 domain-containing protein insig. 25 96
  Pseudomonas sp. BP01 JOY50_RS21995 integrase domain-containing protein insig. 28 95
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 24 95
  Erwinia tracheiphila SCR3 LU632_RS22055 integrase arm-type DNA-binding domain-containing protein insig. 27 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_02735 integrase insig. 27 92
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 26 93
  Shewanella sp. ANA-3 Shewana3_3779 phage integrase family protein (RefSeq) cofit 25 88
  Escherichia coli Nissle 1917 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein insig. 25 92
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 24 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein insig. 25 99
  Dickeya dianthicola 67-19 HGI48_RS07230 integrase arm-type DNA-binding domain-containing protein insig. 27 74
  Escherichia coli BL21 ECD_03516 Int cofit 26 74
  Escherichia coli ECOR38 HEPCGN_14290 fimB integrase insig. 26 74
  Escherichia coli ECOR27 NOLOHH_16100 integrase insig. 26 95
  Dickeya dianthicola 67-19 HGI48_RS01975 integrase arm-type DNA-binding domain-containing protein insig. 26 95
  Escherichia coli ECRC100 OKFHMN_19165 integrase insig. 29 74
  Escherichia coli ECRC101 MCAODC_09685 integrase insig. 29 74
  Escherichia coli ECRC102 NIAGMN_16930 integrase insig. 29 74
  Escherichia coli ECRC99 KEDOAH_08975 integrase no data 29 74
  Dickeya dianthicola 67-19 HGI48_RS13830 integrase arm-type DNA-binding domain-containing protein insig. 27 74
  Escherichia fergusonii Becca EFB2_01922 Prophage integrase IntA insig. 27 74
  Escherichia coli Nissle 1917 ECOLIN_RS11495 integrase arm-type DNA-binding domain-containing protein no data 27 74
  Dickeya dianthicola ME23 DZA65_RS08875 integrase arm-type DNA-binding domain-containing protein insig. 26 74
  Escherichia coli ECRC98 JDDGAC_22795 fimB integrase cofit 29 74
  Escherichia coli ECRC98 JDDGAC_15400 int Integrase insig. 26 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 25 94
  Escherichia fergusonii Becca EFB2_00121 Prophage integrase IntS insig. 24 92
  Pectobacterium carotovorum WPP14 HER17_RS19430 tyrosine-type recombinase/integrase insig. 25 95
  Serratia liquefaciens MT49 IAI46_02380 integrase arm-type DNA-binding domain-containing protein insig. 27 74
  Klebsiella michiganensis M5al BWI76_RS03150 site-specific recombinase, phage integrase family protein insig. 26 92
  Pectobacterium carotovorum WPP14 HER17_RS07975 integrase arm-type DNA-binding domain-containing protein cofit 27 74
  Alteromonas macleodii MIT1002 MIT1002_04073 Putative prophage CPS-53 integrase insig. 25 92
  Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 24 94
  Pseudomonas simiae WCS417 PS417_24120 integrase insig. 28 95
  Magnetospirillum magneticum AMB-1 AMB_RS03365 site-specific integrase insig. 25 94
  Dickeya dadantii 3937 DDA3937_RS13735 integrase arm-type DNA-binding domain-containing protein insig. 26 95
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 25 97
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 27 93
  Dickeya dianthicola ME23 DZA65_RS14320 integrase arm-type DNA-binding domain-containing protein insig. 27 74
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 24 97
  Pectobacterium carotovorum WPP14 HER17_RS18875 tyrosine-type recombinase/integrase insig. 28 74
  Escherichia coli ECOR27 NOLOHH_12785 integrase insig. 28 94
  Escherichia coli ECRC100 OKFHMN_15505 fimB integrase cofit 26 74
  Escherichia coli ECRC101 MCAODC_06015 fimB integrase insig. 26 74
  Escherichia coli ECRC102 NIAGMN_13265 fimB integrase insig. 26 74
  Escherichia coli ECRC98 JDDGAC_19130 fimB integrase cofit 26 74