Homologs of SO2978 from Shewanella oneidensis MR-1

prophage LambdaSo, site-specific recombinase, phage integrase family (NCBI ptt file)
SEED: prophage LambdaSo, site-specific recombinase, phage integrase family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2978 prophage LambdaSo, site-specific recombinase, phage integrase family (NCBI ptt file) strong 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2767 phage integrase, putative insig. 37 95
o Pseudomonas putida KT2440 PP_3889 putative Phage integrase insig. 39 95
o Pseudomonas sp. RS175 PFR28_02691 hypothetical protein sig. 38 97
  Pseudomonas putida KT2440 PP_1555 putative Phage integrase insig. 36 98
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1180 phage integrase, putative insig. 36 71
  Pseudomonas sp. S08-1 OH686_19415 Phage integrase insig. 36 72
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 25 90
  Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 29 65
  Dickeya dadantii 3937 DDA3937_RS03855 integrase insig. 24 77
  Escherichia coli BW25113 b2622 intA CP4-57 prophage; integrase (NCBI) insig. 25 76
  Serratia liquefaciens MT49 IAI46_19730 tyrosine-type recombinase/integrase insig. 24 85
  Escherichia coli ECOR27 NOLOHH_12785 integrase insig. 24 90
  Escherichia coli ECRC62 BNILDI_11480 integrase cofit 24 90
  Enterobacter sp. TBS_079 MPMX20_03492 Prophage integrase IntA insig. 24 76
  Pantoea sp. MT58 IAI47_04780 tyrosine-type recombinase/integrase insig. 25 71
  Escherichia coli ECOR38 HEPCGN_00365 integrase insig. 26 43
  Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 23 79
  Escherichia coli BL21 ECD_02509 Fels-2 prophage protein cofit 25 90
  Escherichia coli ECRC62 BNILDI_09605 integrase cofit 25 68
  Klebsiella michiganensis M5al BWI76_RS12025 integrase insig. 21 96
  Klebsiella michiganensis M5al BWI76_RS10240 hypothetical protein no data 23 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_02735 integrase insig. 24 66
  Escherichia coli ECOR38 HEPCGN_24090 integrase insig. 25 45
  Erwinia amylovora T8 OLJFJH_05740 Tyr recombinase domain-containing protein insig. 25 55
  Pectobacterium carotovorum WPP14 HER17_RS17450 integrase domain-containing protein insig. 23 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3250 Integrase insig. 25 69
  Escherichia coli ECRC102 NIAGMN_24765 integrase insig. 25 45
  Shewanella oneidensis MR-1 SO0388 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 27 39
  Shewanella loihica PV-4 Shew_1267 phage integrase family protein (RefSeq) insig. 24 65
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 23 97
  Escherichia coli ECRC100 OKFHMN_00640 integrase cofit 24 45
  Escherichia coli ECRC101 MCAODC_22445 integrase insig. 24 45
  Escherichia coli ECRC98 JDDGAC_06725 integrase cofit 24 45
  Escherichia coli ECRC99 KEDOAH_24725 integrase no data 24 45
  Erwinia amylovora T8 OLJFJH_17590 integrase insig. 21 86
  Klebsiella michiganensis M5al BWI76_RS21590 integrase insig. 23 66
  Marinobacter adhaerens HP15 HP15_1081 phage integrase family protein insig. 24 67
  Shewanella oneidensis MR-1 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 24 65
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 24 66
  Magnetospirillum magneticum AMB-1 AMB_RS03365 site-specific integrase insig. 28 39
  Escherichia coli ECRC62 BNILDI_08820 integrase cofit 21 71
  Shewanella oneidensis MR-1 SO3013 site-specific recombinase, phage integrase family (NCBI ptt file) strong 22 65
  Dickeya dianthicola ME23 DZA65_RS04000 tyrosine-type recombinase/integrase insig. 23 71
  Enterobacter asburiae PDN3 EX28DRAFT_2648 Integrase insig. 26 57
  Serratia liquefaciens MT49 IAI46_19665 tyrosine-type recombinase/integrase insig. 23 72
  Dickeya dadantii 3937 DDA3937_RS09105 tyrosine-type recombinase/integrase insig. 25 72
  Rahnella sp. WP5 EX31_RS14515 site-specific integrase insig. 23 69
  Escherichia coli Nissle 1917 ECOLIN_RS26185 integrase arm-type DNA-binding domain-containing protein insig. 20 96
  Pseudomonas stutzeri RCH2 Psest_4016 Integrase insig. 22 59
  Pseudomonas sp. S08-1 OH686_21775 Phage integrase insig. 24 57
  Escherichia coli BL21 ECD_03516 Int cofit 20 87
  Escherichia coli ECOR38 HEPCGN_14290 fimB integrase insig. 20 87
  Dickeya dadantii 3937 DDA3937_RS16520 tyrosine-type recombinase/integrase insig. 23 68
  Escherichia coli ECRC100 OKFHMN_04390 fimB integrase no data 27 40
  Escherichia coli ECRC100 OKFHMN_05780 fimB integrase no data 27 40
  Escherichia coli ECRC101 MCAODC_23750 fimB integrase insig. 27 40
  Escherichia coli ECRC102 NIAGMN_03820 fimB integrase insig. 27 40
  Escherichia coli ECRC98 JDDGAC_08000 fimB integrase cofit 27 40
  Escherichia coli ECRC99 KEDOAH_23355 fimB integrase no data 27 40
  Escherichia coli Nissle 1917 ECOLIN_RS05355 tyrosine-type recombinase/integrase insig. 27 40
  Erwinia tracheiphila SCR3 LU632_RS13705 tyrosine-type recombinase/integrase insig. 26 40
  Pseudomonas simiae WCS417 PS417_00885 integrase insig. 23 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS03565 site-specific integrase insig. 24 67
  Pseudomonas fluorescens SBW25 PFLU_RS00900 tyrosine-type recombinase/integrase insig. 22 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00900 tyrosine-type recombinase/integrase insig. 22 86
  Escherichia coli ECRC100 OKFHMN_15505 fimB integrase cofit 20 97
  Escherichia coli ECRC101 MCAODC_06015 fimB integrase insig. 20 97
  Escherichia coli ECRC102 NIAGMN_13265 fimB integrase insig. 20 97
  Escherichia coli ECRC98 JDDGAC_19130 fimB integrase cofit 20 97
  Escherichia coli ECRC99 KEDOAH_12640 fimB integrase no data 20 97
  Dickeya dianthicola ME23 DZA65_RS07740 integrase arm-type DNA-binding domain-containing protein insig. 26 65
  Escherichia fergusonii Becca EFB2_00121 Prophage integrase IntS insig. 22 71
  Dechlorosoma suillum PS Dsui_0218 Integrase sig. 24 52
  Alteromonas macleodii MIT1002 MIT1002_04073 Putative prophage CPS-53 integrase insig. 24 54
  Pseudomonas fluorescens SBW25 PFLU_RS09280 DUF4102 domain-containing protein insig. 24 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09280 DUF4102 domain-containing protein insig. 24 64
  Escherichia coli ECRC100 OKFHMN_24570 Integrase cofit 24 55
  Escherichia coli ECRC98 JDDGAC_28680 Integrase insig. 24 55
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01970 integrase arm-type DNA-binding domain-containing protein insig. 22 66
  Rhodanobacter sp. FW510-T8 OKGIIK_15870 integrase insig. 25 66
  Escherichia coli ECRC99 KEDOAH_03580 Integrase no data 24 55
  Burkholderia phytofirmans PsJN BPHYT_RS32410 integrase insig. 24 59
  Escherichia coli ECRC100 OKFHMN_09385 fimB integrase insig. 23 65
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 23 65
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase cofit 23 65
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3387 Phage integrase insig. 24 65
  Escherichia fergusonii Becca EFB2_03054 Prophage integrase IntA insig. 26 40
  Pseudomonas fluorescens SBW25 PFLU_RS24915 tyrosine-type recombinase/integrase insig. 22 71
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24915 tyrosine-type recombinase/integrase insig. 22 71
  Kangiella aquimarina DSM 16071 B158DRAFT_0218 Site-specific recombinase XerD insig. 30 35
  Escherichia coli Nissle 1917 ECOLIN_RS11360 integrase arm-type DNA-binding domain-containing protein no data 23 94
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 21 65
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4152 Phage integrase, Phage P4-associated insig. 24 58
  Variovorax sp. OAS795 ABID97_RS18175 integrase arm-type DNA-binding domain-containing protein insig. 24 65
  Dechlorosoma suillum PS Dsui_1791 Integrase cofit 25 58
  Xanthobacter sp. DMC5 GFF2134 Prophage integrase IntA insig. 25 45
  Escherichia fergusonii Becca EFB2_00168 Prophage integrase IntA insig. 21 69
  Serratia liquefaciens MT49 IAI46_09295 tyrosine-type recombinase/integrase insig. 26 45
  Pantoea sp. MT58 IAI47_19955 site-specific integrase insig. 24 70